Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VPS8Q8N3P4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 RNU6-352P-201ENST00000516908 107 ntBASIC6.35□□□□□ -1.39
VPS8Q8N3P4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.35□□□□□ -1.39
VPS8Q8N3P4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 AC074050.1-201ENST00000563247 211 ntBASIC6.35□□□□□ -1.39
VPS8Q8N3P4 AC099676.1-201ENST00000608886 657 ntBASIC6.35□□□□□ -1.39
VPS8Q8N3P4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 SAMMSON-213ENST00000641336 1521 ntBASIC6.35□□□□□ -1.39
VPS8Q8N3P4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
VPS8Q8N3P4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 MIR134-201ENST00000385258 73 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 RPL17P36-201ENST00000420302 549 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 EIF4EP1-201ENST00000422311 642 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC092691.2-201ENST00000461787 803 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC069240.1-201ENST00000548774 375 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC106785.1-201ENST00000565935 262 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 AC104662.1-201ENST00000604448 511 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 HSPD1P11-201ENST00000508643 1702 ntBASIC6.34□□□□□ -1.39
VPS8Q8N3P4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
VPS8Q8N3P4 RNA5SP388-201ENST00000362584 119 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 OR13Z1P-201ENST00000416141 834 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 OR8F1P-201ENST00000425243 930 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC087499.8-201ENST00000578406 226 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC053481.4-201ENST00000583164 216 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC022916.3-201ENST00000592961 742 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC068020.1-201ENST00000594215 661 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 MIR6875-201ENST00000617506 72 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 A2MP1-204ENST00000566278 4130 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 RPL32P23-201ENST00000397237 405 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 NDUFA5P2-201ENST00000519723 344 ntBASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS8Q8N3P4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AL450992.3-201ENST00000413192 568 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 FABP3P2-201ENST00000453169 399 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 STMN1P2-201ENST00000508435 439 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms