Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC093166.4-201ENST00000457867 318 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL603882.1-201ENST00000463059 681 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 UBFD1P1-201ENST00000473259 814 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SNRPCP3-201ENST00000474888 476 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 NENFP3-201ENST00000503735 313 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 RNY4P37-201ENST00000516225 96 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 NPM1P6-201ENST00000521088 871 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 ZNF519P3-201ENST00000557158 1032 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC010487.1-201ENST00000594408 1172 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 VN1R92P-201ENST00000598511 928 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC011451.2-201ENST00000604303 598 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AL109618.2-201ENST00000605527 211 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 OR8G7P-201ENST00000616658 848 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AC145207.9-201ENST00000623802 325 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 OR11H2-202ENST00000641517 1085 ntBASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM48Q8IWZ4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM48Q8IWZ4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 CR383658.2-201ENST00000547576 1525 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 MIR323A-201ENST00000362199 86 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-839P-201ENST00000363347 108 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP69-201ENST00000365390 305 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 GNG5P2-201ENST00000372054 207 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-348P-201ENST00000384386 107 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP222-201ENST00000410651 315 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC068533.2-201ENST00000411872 306 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC015977.1-201ENST00000418887 292 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 TXNP5-201ENST00000441043 315 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 PPIAP20-201ENST00000449839 135 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC093392.2-201ENST00000450682 337 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AL035404.1-201ENST00000497982 568 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC011352.3-201ENST00000505162 593 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RPL7L1P13-201ENST00000511702 739 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 CYCSP22-201ENST00000517555 339 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 IGKV2D-10-201ENST00000520194 281 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OR8A2P-201ENST00000528631 952 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC084757.1-201ENST00000559987 490 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AC012146.2-201ENST00000576545 416 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AP005431.1-201ENST00000618479 319 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM48Q8IWZ4 MIR4302-201ENST00000638058 60 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms