Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RHEBP2-201ENST00000450289 600 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RPL23AP56-201ENST00000460778 453 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RPS4XP12-201ENST00000461747 709 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RN7SL319P-201ENST00000480656 221 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC126121.1-201ENST00000482313 553 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RPL21P131-201ENST00000497298 483 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 OR2A20P-203ENST00000498397 1268 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC020937.1-201ENST00000519677 1013 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 IGLV2-28-201ENST00000520681 304 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC061975.8-201ENST00000587058 721 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AL035411.2-201ENST00000604022 421 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC073137.1-201ENST00000605636 634 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC013562.2-201ENST00000611632 603 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AC013470.4-201ENST00000619978 986 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ZNF549Q6P9A3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 DDX18P6-201ENST00000450119 1997 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC097063.1-201ENST00000426714 1797 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 CASC19-281ENST00000642118 1554 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RNU6-1214P-201ENST00000363650 109 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 TATDN1P1-201ENST00000414123 891 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RAB9AP4-201ENST00000415230 609 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 HMGB1P49-201ENST00000418882 569 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 EIF4HP2-201ENST00000424380 563 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC092162.1-201ENST00000432828 434 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC084290.1-201ENST00000434995 374 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RPL7P11-201ENST00000437586 658 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL627224.1-201ENST00000448334 444 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC026414.1-201ENST00000504046 698 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC006499.3-201ENST00000506077 748 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RN7SKP66-201ENST00000516681 231 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 RN7SKP147-201ENST00000517154 244 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 HAUS8P1-201ENST00000549005 542 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 CYB5AP5-201ENST00000549779 389 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AL360219.1-201ENST00000610230 366 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC019206.1-201ENST00000621938 425 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 AC090897.3-201ENST00000636973 1157 ntBASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
ZNF549Q6P9A3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.84□□□□□ -1.64
ZNF549Q6P9A3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms