Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 OR4K7P-201ENST00000580232 945 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 VN1R82P-201ENST00000601481 356 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AL031281.1-201ENST00000604049 488 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 FAM27E4-201ENST00000605259 342 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC090607.5-201ENST00000615692 224 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC244100.4-201ENST00000617747 388 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC048341.3-201ENST00000619323 491 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC129778.1-202ENST00000623812 261 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC073592.6-201ENST00000624271 415 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AL591379.1-207ENST00000635982 261 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 AC073869.10-201ENST00000642016 354 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.25□□□□□ -1.57
RNF220Q5VTB9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RNF220Q5VTB9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC068870.1-201ENST00000563737 2455 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PANDAR-201ENST00000629595 1506 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL451142.2-201ENST00000429076 2090 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL121886.1-201ENST00000358609 435 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RNU5D-1-201ENST00000363299 116 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RNU5A-2P-201ENST00000384337 116 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RPL23AP47-201ENST00000408017 460 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 IPMKP1-201ENST00000425988 855 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL513175.1-201ENST00000431492 780 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL050321.1-201ENST00000432363 400 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 TMEM183AP1-205ENST00000432739 290 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC010881.1-201ENST00000433830 235 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC073465.2-201ENST00000440938 498 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 EIF4A1P11-201ENST00000451239 222 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 HMGN3P1-201ENST00000453847 193 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 DNAJB5P1-201ENST00000454004 806 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RPL7P18-201ENST00000478965 734 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC104090.1-201ENST00000506341 1171 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC025674.1-201ENST00000507074 324 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RNU6-1129P-201ENST00000515964 104 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 Y_RNA.667-201ENST00000516212 107 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RN7SKP31-201ENST00000516354 278 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RN7SKP253-201ENST00000516424 309 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 RN7SL435P-201ENST00000584418 282 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC095055.1-201ENST00000603472 1113 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL133507.1-201ENST00000605269 557 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AL360219.1-201ENST00000610230 366 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC009318.3-201ENST00000616916 503 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC069209.1-201ENST00000619282 651 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC067852.7-201ENST00000623270 535 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC112694.2-201ENST00000623697 768 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 MKKS-204ENST00000639674 192 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 AC025125.1-201ENST00000624743 1922 ntBASIC5.24□□□□□ -1.57
RNF220Q5VTB9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF220Q5VTB9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms