Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 RN7SKP185-201ENST00000362813 326 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 HPRT1P2-201ENST00000505250 544 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC008171.1-201ENST00000395058 200 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 RNU6-352P-201ENST00000516908 107 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AL672167.1-203ENST00000641299 2975 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 MFSD8-242ENST00000641690 4199 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC068769.1-201ENST00000474767 2426 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC008549.2-201ENST00000333482 706 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 U3.26-201ENST00000391236 204 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 RN7SL809P-201ENST00000482040 297 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AL162574.1-201ENST00000615702 950 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 AC243312.2-201ENST00000623340 601 ntBASIC4.1□□□□□ -1.75
RIF1Q5UIP0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RIF1Q5UIP0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 RPS7P15-201ENST00000415804 584 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 PRDX3P3-201ENST00000447765 522 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 RPL38P1-201ENST00000460914 211 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 RPS4XP12-201ENST00000461747 709 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 RN7SKP248-201ENST00000516278 305 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 MIR4433B-201ENST00000581329 102 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 BNIP3P10-201ENST00000605360 577 ntBASIC4.09□□□□□ -1.75
RIF1Q5UIP0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIF1Q5UIP0 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AL355852.1-201ENST00000454081 1771 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 NACA3P-201ENST00000359690 648 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 USP9YP36-201ENST00000424581 829 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 USP9YP31-201ENST00000431405 881 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AC016559.2-201ENST00000510759 359 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 RPL23AP53-201ENST00000521854 457 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AC006504.3-201ENST00000586818 523 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.76
RIF1Q5UIP0 CR392039.4-201ENST00000624968 501 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 AL121839.2-201ENST00000565058 6943 ntBASIC4.09□□□□□ -1.76
RIF1Q5UIP0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AC107068.1-201ENST00000563286 4218 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 RPL7P28-201ENST00000437739 740 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AC015726.1-201ENST00000602353 681 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AC010680.3-201ENST00000604215 520 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 AL645927.2-201ENST00000618350 349 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 FP325313.1-201ENST00000638228 703 ntBASIC4.08□□□□□ -1.76
RIF1Q5UIP0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms