Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 CYCSP24-201ENST00000445119 316 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RPS26P41-201ENST00000450370 284 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AL672138.1-201ENST00000450604 1015 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC020898.1-201ENST00000474167 787 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RPS4XP6-201ENST00000477670 797 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC104687.1-201ENST00000485829 412 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 SNRPCP2-201ENST00000504370 475 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC100784.1-201ENST00000522790 310 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC010735.1-201ENST00000567305 1026 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC110743.1-201ENST00000584870 478 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC245884.10-201ENST00000597355 337 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC079610.2-201ENST00000604818 690 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RNU6-1192P-201ENST00000612197 107 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RNU6-489P-201ENST00000618289 107 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC139769.3-201ENST00000618383 175 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC073569.3-201ENST00000619055 682 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 MIR6758-201ENST00000620653 63 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC132068.1-201ENST00000623805 459 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AP003485.1-201ENST00000625093 753 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC083865.1-201ENST00000636634 831 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC006927.2-201ENST00000639256 389 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 MRE11P1-201ENST00000464884 2127 ntBASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM3Q53GG5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC074029.4-201ENST00000624796 1859 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 OR52B1P-201ENST00000316506 909 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 MIR23B-201ENST00000384832 97 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 SNORA48.7-201ENST00000391302 135 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 GSTM3P2-201ENST00000412746 530 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC013404.1-201ENST00000413068 249 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC007738.1-201ENST00000413892 348 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 TCEA1P2-201ENST00000420496 906 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AL133173.1-201ENST00000423458 397 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 NPM1P24-201ENST00000428039 894 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ELOCP6-201ENST00000429066 328 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AL353093.1-201ENST00000441292 436 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 VDAC2P4-201ENST00000452925 711 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC008280.2-201ENST00000455473 307 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 ELOCP12-201ENST00000458706 328 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC079168.1-201ENST00000458741 345 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 RPS23P7-201ENST00000466210 444 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 RPL23AP12-201ENST00000467573 473 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 RN7SL814P-201ENST00000487715 300 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC008897.1-201ENST00000494006 347 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 SCARNA1-201ENST00000517138 166 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC021451.1-201ENST00000523498 1129 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 OR8A2P-201ENST00000528631 952 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 BNIP3P5-201ENST00000562290 498 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC022884.2-201ENST00000578535 580 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC124283.4-201ENST00000581815 456 ntBASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM3Q53GG5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms