Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC114878.2-201ENST00000604863 1251 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC009163.6-201ENST00000612367 342 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC067852.7-201ENST00000623270 535 ntBASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC144BQ3MJ40 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 AC025125.1-201ENST00000624743 1922 ntBASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 MAPK10-338ENST00000641647 3362 ntBASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC144BQ3MJ40 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 Y_RNA.169-201ENST00000363745 96 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 SNORD116-23-201ENST00000384645 92 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 RNU1-77P-201ENST00000390868 162 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 RPL11P3-201ENST00000395256 523 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 VTI1BP4-201ENST00000427516 527 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 TXNL1P1-201ENST00000429528 554 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 RPS27P18-201ENST00000431701 247 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC006335.2-201ENST00000437993 330 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AL672138.1-201ENST00000450604 1015 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AL133217.1-201ENST00000450980 425 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 HMGN3P1-201ENST00000453847 193 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC079841.1-201ENST00000481228 950 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 BET1P1-201ENST00000482276 359 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC231760.1-201ENST00000498002 260 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 MTND1P22-201ENST00000510572 951 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-885P-201ENST00000516607 104 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC105185.1-201ENST00000518705 535 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC125611.1-201ENST00000549563 229 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AL592221.1-201ENST00000605266 382 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC005332.6-201ENST00000613178 446 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC109315.1-201ENST00000584143 1347 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AC107027.3-201ENST00000565095 3473 ntBASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC144BQ3MJ40 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC004656.1-201ENST00000568479 4951 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AL591135.1-201ENST00000401578 5914 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-492P-201ENST00000363035 104 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-115P-201ENST00000364310 107 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 SUGT1P1-201ENST00000379514 476 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 RN7SKP273-201ENST00000411392 314 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 GPS2P1-201ENST00000411761 986 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AL161449.1-201ENST00000414531 1199 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AL365338.1-201ENST00000422282 858 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 SKP1P3-201ENST00000429280 487 ntBASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC144BQ3MJ40 CYCSP6-201ENST00000434498 302 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms