Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 MTND1P15-201ENST00000579262 949 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 OR4G1P-201ENST00000588632 938 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 ELOCP28-201ENST00000590044 317 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.8□□□□□ -1.64
SRSF4Q08170 AL451074.6-201ENST00000608512 729 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 AL391497.1-201ENST00000608671 547 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 AC024941.1-201ENST00000612250 334 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 AC008498.1-201ENST00000613012 531 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.8□□□□□ -1.64
SRSF4Q08170 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.8□□□□□ -1.64
SRSF4Q08170 MIR4278-201ENST00000636094 69 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.8□□□□□ -1.64
SRSF4Q08170 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 AL355852.1-201ENST00000454081 1771 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SRSF4Q08170 THAP12P5-201ENST00000405864 2275 ntBASIC4.8□□□□□ -1.64
SRSF4Q08170 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SRSF4Q08170 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRSF4Q08170 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SRSF4Q08170 OR9K1P-201ENST00000326513 941 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 Y_RNA.303-201ENST00000364998 94 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 Y_RNA.390-201ENST00000383932 102 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.79□□□□□ -1.64
SRSF4Q08170 COX5BP7-201ENST00000414780 274 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 TAF13P2-201ENST00000416876 286 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 BX284632.2-201ENST00000421091 399 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 EIF1P1-201ENST00000421436 341 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 RPL21P43-201ENST00000425440 472 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 FTLP19-201ENST00000433300 394 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 RPS12P17-201ENST00000438591 377 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AL512605.1-202ENST00000441919 381 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 USP9YP29-201ENST00000445112 563 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AL359955.2-201ENST00000445380 353 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 CDC27P1-201ENST00000445384 715 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AL445665.1-202ENST00000452436 324 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 SUMO2P2-201ENST00000456482 255 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC104164.1-201ENST00000460282 590 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 RPS20P4-201ENST00000461659 355 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC021660.1-201ENST00000465006 554 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 HMGB3P13-201ENST00000511263 607 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 SNORA31.13-201ENST00000516624 135 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 DUXAP2-201ENST00000519198 589 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SRSF4Q08170 WBP1LP3-201ENST00000523033 208 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC022404.1-201ENST00000555320 273 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC245505.1-201ENST00000556398 224 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.79□□□□□ -1.64
SRSF4Q08170 MIR548S-201ENST00000581352 82 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 MIR3936-201ENST00000584304 110 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 BMS1P7-201ENST00000602440 1052 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC007684.1-201ENST00000609671 477 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC012409.3-201ENST00000611343 981 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC016769.4-201ENST00000616893 535 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 AC015722.2-201ENST00000622210 551 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SRSF4Q08170 TTC39DP-201ENST00000416781 1688 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 AC025574.1-201ENST00000554784 1653 ntBASIC4.79□□□□□ -1.64
SRSF4Q08170 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRSF4Q08170 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SRSF4Q08170 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.79□□□□□ -1.64
SRSF4Q08170 MTND4P29-201ENST00000503122 1372 ntBASIC4.78□□□□□ -1.64
SRSF4Q08170 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SRSF4Q08170 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRSF4Q08170 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.78□□□□□ -1.64
SRSF4Q08170 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.78□□□□□ -1.64
SRSF4Q08170 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms