Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX6-1P78426 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AL512347.1-201ENST00000566420 503 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 MIR3915-201ENST00000578518 97 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 MIR4505-201ENST00000582238 73 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC135507.1-201ENST00000607214 561 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC079395.2-201ENST00000610982 737 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX6-1P78426 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.15□□□□□ -1.59
NKX6-1P78426 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX6-1P78426 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC004158.1-201ENST00000564508 4319 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.15□□□□□ -1.59
NKX6-1P78426 AC109446.4-201ENST00000623235 2755 ntBASIC5.15□□□□□ -1.59
NKX6-1P78426 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NKX6-1P78426 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NKX6-1P78426 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 U3.7-201ENST00000363668 216 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 Y_RNA.201-201ENST00000364052 96 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC016739.1-201ENST00000405359 345 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 MTCO3P31-201ENST00000405526 789 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 SNRPEP6-201ENST00000407465 277 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 RNU4-34P-201ENST00000410431 124 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 MYL6P5-201ENST00000412707 459 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC092634.6-201ENST00000418558 192 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC093155.2-201ENST00000420734 937 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 IFNNP1-201ENST00000429219 553 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 RPS27P18-201ENST00000431701 247 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 RPS7P3-201ENST00000443360 580 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 MTCO2P7-201ENST00000446518 666 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 SDC4P-201ENST00000453285 601 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 MTCO3P16-201ENST00000454456 754 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX6-1P78426 RN7SL799P-201ENST00000475891 298 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 SIAH1P1-201ENST00000479411 923 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AL035690.1-201ENST00000490892 383 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 KLRA1P-201ENST00000503499 986 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 OR5M14P-201ENST00000506803 618 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 HMGB1P44-201ENST00000508597 572 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX6-1P78426 SOD1P3-201ENST00000518682 454 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX6-1P78426 AL121766.1-201ENST00000547436 487 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC044860.2-201ENST00000561005 179 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AC012435.1-202ENST00000568772 240 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AP005262.1-201ENST00000582646 997 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX6-1P78426 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX6-1P78426 AL021918.2-201ENST00000613415 194 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC008443.7-201ENST00000622195 246 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 Z69908.1-201ENST00000622603 247 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 AC127502.3-201ENST00000636170 1206 ntBASIC5.14□□□□□ -1.59
NKX6-1P78426 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms