Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RAE1P78406 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.92□□□□□ -1.62
RAE1P78406 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.92□□□□□ -1.62
RAE1P78406 AC046144.1-201ENST00000478559 1853 ntBASIC4.92□□□□□ -1.62
RAE1P78406 AC120338.1-201ENST00000625074 1541 ntBASIC4.92□□□□□ -1.62
RAE1P78406 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAE1P78406 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 AP001284.1-201ENST00000528393 2118 ntBASIC4.91□□□□□ -1.62
RAE1P78406 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RAE1P78406 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 AC097063.1-201ENST00000426714 1797 ntBASIC4.91□□□□□ -1.62
RAE1P78406 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RAE1P78406 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RAE1P78406 SNORD116-1-201ENST00000384335 95 ntBASIC4.91□□□□□ -1.62
RAE1P78406 SNORA67-201ENST00000384423 137 ntBASIC4.91□□□□□ -1.62
RAE1P78406 MIR16-1-201ENST00000385271 89 ntBASIC4.91□□□□□ -1.62
RAE1P78406 RSL24D1P4-201ENST00000400938 484 ntBASIC4.91□□□□□ -1.62
RAE1P78406 NUDT19P3-201ENST00000404698 555 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL590290.1-201ENST00000405336 380 ntBASIC4.91□□□□□ -1.62
RAE1P78406 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AC006960.1-201ENST00000419980 153 ntBASIC4.91□□□□□ -1.62
RAE1P78406 PTP4A1P5-201ENST00000420305 455 ntBASIC4.91□□□□□ -1.62
RAE1P78406 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AL009174.1-201ENST00000426577 416 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL390023.1-201ENST00000428836 262 ntBASIC4.91□□□□□ -1.62
RAE1P78406 RPS24P8-201ENST00000431490 402 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 RPL21P110-201ENST00000433345 446 ntBASIC4.91□□□□□ -1.62
RAE1P78406 UBE2D3P1-201ENST00000436669 444 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AP000936.3-201ENST00000438127 255 ntBASIC4.91□□□□□ -1.62
RAE1P78406 HMGB1P16-201ENST00000447155 540 ntBASIC4.91□□□□□ -1.62
RAE1P78406 MTND1P29-201ENST00000448112 647 ntBASIC4.91□□□□□ -1.62
RAE1P78406 RSL24D1P3-201ENST00000449255 495 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 Z92846.1-201ENST00000456203 268 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AC011225.1-201ENST00000457751 369 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL161747.1-201ENST00000480068 358 ntBASIC4.91□□□□□ -1.62
RAE1P78406 UBA52P7-201ENST00000486088 380 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL136038.1-201ENST00000497246 351 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL035404.1-201ENST00000497982 568 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 OR5BM1P-201ENST00000512021 366 ntBASIC4.91□□□□□ -1.62
RAE1P78406 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RAE1P78406 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.91□□□□□ -1.62
RAE1P78406 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AC090888.1-201ENST00000561335 1141 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.91□□□□□ -1.62
RAE1P78406 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RAE1P78406 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.91□□□□□ -1.62
RAE1P78406 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AL358072.1-201ENST00000604156 575 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL353726.1-201ENST00000614041 1000 ntBASIC4.91□□□□□ -1.62
RAE1P78406 RPSAP73-201ENST00000614820 330 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.91□□□□□ -1.62
RAE1P78406 AC022509.4-201ENST00000621404 572 ntBASIC4.91□□□□□ -1.62
RAE1P78406 AC006840.1-201ENST00000623069 542 ntBASIC4.91□□□□□ -1.62
RAE1P78406 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
RAE1P78406 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RAE1P78406 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAE1P78406 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms