Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.54□□□□□ -1.68
CDH4P55283 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.54□□□□□ -1.68
CDH4P55283 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH4P55283 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH4P55283 AC008033.1-201ENST00000216407 1162 ntBASIC4.54□□□□□ -1.68
CDH4P55283 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
CDH4P55283 RNU6-618P-201ENST00000363518 112 ntBASIC4.54□□□□□ -1.68
CDH4P55283 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH4P55283 AL592293.2-201ENST00000422292 996 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AL355994.1-201ENST00000424379 260 ntBASIC4.54□□□□□ -1.68
CDH4P55283 HMGB1P32-201ENST00000425971 565 ntBASIC4.54□□□□□ -1.68
CDH4P55283 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
CDH4P55283 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC016712.1-201ENST00000431088 378 ntBASIC4.54□□□□□ -1.68
CDH4P55283 MTCO1P45-201ENST00000431457 267 ntBASIC4.54□□□□□ -1.68
CDH4P55283 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 UBE2V1P3-201ENST00000439651 417 ntBASIC4.54□□□□□ -1.68
CDH4P55283 PHBP16-201ENST00000446318 950 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AL354710.1-201ENST00000453641 246 ntBASIC4.54□□□□□ -1.68
CDH4P55283 SEPT14P1-201ENST00000458703 648 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC092905.1-201ENST00000467527 949 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC011276.1-201ENST00000469688 323 ntBASIC4.54□□□□□ -1.68
CDH4P55283 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
CDH4P55283 RN7SL812P-201ENST00000493791 279 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC093840.1-201ENST00000511599 336 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 AC010476.1-201ENST00000519111 851 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH4P55283 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH4P55283 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC145207.9-201ENST00000623802 325 ntBASIC4.54□□□□□ -1.68
CDH4P55283 AC090017.1-201ENST00000548612 1779 ntBASIC4.54□□□□□ -1.68
CDH4P55283 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH4P55283 AC027290.2-201ENST00000623210 18662 ntBASIC4.54□□□□□ -1.68
CDH4P55283 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH4P55283 EOGT-210ENST00000615922 1931 ntBASIC4.54□□□□□ -1.68
CDH4P55283 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH4P55283 AC126323.6-202ENST00000568092 3511 ntBASIC4.54□□□□□ -1.68
CDH4P55283 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 AL672167.1-203ENST00000641299 2975 ntBASIC4.53□□□□□ -1.68
CDH4P55283 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CDH4P55283 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDH4P55283 OR4K17-201ENST00000315543 1032 ntBASIC4.53□□□□□ -1.68
CDH4P55283 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 RNA5SP509-201ENST00000364577 119 ntBASIC4.53□□□□□ -1.68
CDH4P55283 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 SNORA11F-201ENST00000408237 128 ntBASIC4.53□□□□□ -1.68
CDH4P55283 SNORA74C-2-201ENST00000411179 201 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AL139095.3-201ENST00000419672 1203 ntBASIC4.53□□□□□ -1.68
CDH4P55283 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH4P55283 CDY14P-201ENST00000431260 1014 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH4P55283 MTCYBP29-201ENST00000436327 1006 ntBASIC4.53□□□□□ -1.68
CDH4P55283 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH4P55283 CDY12P-201ENST00000440679 1015 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AL357520.1-201ENST00000441557 453 ntBASIC4.53□□□□□ -1.68
CDH4P55283 CDY13P-201ENST00000445813 1015 ntBASIC4.53□□□□□ -1.68
CDH4P55283 CDY23P-201ENST00000451661 1014 ntBASIC4.53□□□□□ -1.68
CDH4P55283 ATP5G1P3-201ENST00000463301 410 ntBASIC4.53□□□□□ -1.68
CDH4P55283 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 RNA5SP464-201ENST00000516251 108 ntBASIC4.53□□□□□ -1.68
CDH4P55283 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.53□□□□□ -1.68
CDH4P55283 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH4P55283 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH4P55283 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
CDH4P55283 SNORD91B-202ENST00000608459 222 ntBASIC4.53□□□□□ -1.68
CDH4P55283 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH4P55283 AC140113.4-201ENST00000622087 222 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH4P55283 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AC015908.5-201ENST00000623289 343 ntBASIC4.53□□□□□ -1.68
CDH4P55283 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH4P55283 BMS1P21-201ENST00000634565 365 ntBASIC4.53□□□□□ -1.68
CDH4P55283 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH4P55283 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDH4P55283 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 CASC19-284ENST00000642142 1868 ntBASIC4.53□□□□□ -1.68
CDH4P55283 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH4P55283 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH4P55283 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH4P55283 BX005019.1-201ENST00000561881 1810 ntBASIC4.53□□□□□ -1.68
CDH4P55283 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH4P55283 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms