Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CFL1P1-202ENST00000432948 411 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 ATP5F1P1-201ENST00000433775 569 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC008072.1-201ENST00000434254 824 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 TCEA1P3-201ENST00000443005 880 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 CYCSP51-201ENST00000443545 318 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 RNU7-140P-201ENST00000459546 60 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC100832.1-201ENST00000471945 383 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 OR2AO1P-201ENST00000476497 403 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 TMED11P-201ENST00000479478 690 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 PPP1R11P1-201ENST00000486095 376 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC023424.2-201ENST00000493479 777 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 FAM92A1P2-202ENST00000504766 877 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC008837.2-201ENST00000513076 418 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC025465.4-201ENST00000513422 638 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 PRELID3BP4-201ENST00000515476 571 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC027026.1-201ENST00000532323 742 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 AL121594.2-201ENST00000541658 472 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 AC126615.2-201ENST00000553003 515 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 AC051619.2-201ENST00000559063 397 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 MRPS21P7-201ENST00000566937 238 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.99□□□□□ -1.45
EPHB3P54753 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 BNIP3P26-201ENST00000600827 554 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AL022154.1-201ENST00000604698 785 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 RNU6-84P-201ENST00000607737 102 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AC004948.1-201ENST00000609858 672 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 MIR7844-201ENST00000616161 122 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 AL357080.1-201ENST00000617394 239 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 RMST_5.1-201ENST00000618704 126 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
EPHB3P54753 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.99□□□□□ -1.45
EPHB3P54753 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
EPHB3P54753 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EPHB3P54753 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 DDX18P6-201ENST00000450119 1997 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 AC034229.2-201ENST00000566945 2508 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 Y_RNA.256-201ENST00000364594 104 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 RNA5SP30-201ENST00000365552 115 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 RNU4-2-201ENST00000365668 141 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
EPHB3P54753 RNU6-31P-201ENST00000384388 108 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 TAF9BP1-201ENST00000396646 746 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AP000534.2-201ENST00000412729 568 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AC138393.2-201ENST00000414742 246 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.98□□□□□ -1.45
EPHB3P54753 OR8F1P-201ENST00000425243 930 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 BRWD1P3-201ENST00000428816 390 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 AL662791.1-201ENST00000441992 928 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 MEMO1P4-201ENST00000453590 386 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 RN7SL547P-201ENST00000490793 290 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.98□□□□□ -1.45
EPHB3P54753 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.98□□□□□ -1.45
EPHB3P54753 RNU6-507P-201ENST00000516045 100 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 RN7SKP141-201ENST00000516167 338 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 OR5AL2P-201ENST00000532185 920 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 OR8L1P-201ENST00000534005 955 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
EPHB3P54753 RAB11AP2-201ENST00000545905 639 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.98□□□□□ -1.45
EPHB3P54753 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.98□□□□□ -1.45
EPHB3P54753 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.98□□□□□ -1.45
EPHB3P54753 OR7E18P-201ENST00000592589 702 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms