Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 AC091390.1-201ENST00000433904 331 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 ZFAND6P1-201ENST00000434138 605 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AL589765.3-201ENST00000446084 462 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 H2AFZP5-201ENST00000446960 382 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AL157827.1-201ENST00000447622 132 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 TPT1P12-201ENST00000448968 492 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC108463.1-201ENST00000450258 347 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 CEACAMP6-201ENST00000452007 574 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK2P53671 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 RPL21P6-201ENST00000479171 504 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 HMGB1P3-201ENST00000502802 616 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.62□□□□□ -1.67
LIMK2P53671 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK2P53671 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK2P53671 AC098799.3-201ENST00000506095 438 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 COL6A4P2-205ENST00000509855 506 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 HMGB1P19-201ENST00000517578 577 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC034205.1-201ENST00000520621 638 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK2P53671 AL110118.1-201ENST00000553543 400 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 AC091178.1-203ENST00000584586 279 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 SLC25A36P1-201ENST00000590111 465 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK2P53671 RPL26P30-202ENST00000602923 645 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC008966.2-201ENST00000606157 453 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AP000240.1-201ENST00000609910 452 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK2P53671 AL731566.2-201ENST00000618971 317 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AL356094.1-201ENST00000624663 1212 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK2P53671 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK2P53671 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK2P53671 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK2P53671 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK2P53671 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK2P53671 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK2P53671 KARSP3-201ENST00000571212 1504 ntBASIC4.62□□□□□ -1.67
LIMK2P53671 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK2P53671 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LIMK2P53671 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC026951.1-201ENST00000559530 2459 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 AC126755.2-208ENST00000327792 462 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC138969.1-213ENST00000331436 462 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 RNA5SP151-201ENST00000365632 117 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 OR6K4P-201ENST00000423179 955 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 AL935212.3-201ENST00000450729 284 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC022431.1-201ENST00000450941 438 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC092905.1-201ENST00000467527 949 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 RN7SL41P-201ENST00000476144 297 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC093267.1-201ENST00000489176 961 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 RPL36AP41-201ENST00000493820 306 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 RNU2-30P-201ENST00000516209 141 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK2P53671 ADAD1P2-201ENST00000588476 646 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC023762.1-201ENST00000603280 584 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK2P53671 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LIMK2P53671 AC020978.9-201ENST00000624380 1141 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 HPVC1-201ENST00000629899 1198 ntBASIC4.61□□□□□ -1.67
LIMK2P53671 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK2P53671 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LIMK2P53671 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK2P53671 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LIMK2P53671 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK2P53671 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
LIMK2P53671 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK2P53671 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK2P53671 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK2P53671 SNORD113.2-201ENST00000364166 89 ntBASIC4.6□□□□□ -1.67
LIMK2P53671 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK2P53671 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms