Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
USP11P51784 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
USP11P51784 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.65□□□□□ -1.34
USP11P51784 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USP11P51784 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.65□□□□□ -1.34
USP11P51784 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
USP11P51784 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
USP11P51784 AC010132.2-201ENST00000295493 1043 ntBASIC6.65□□□□□ -1.34
USP11P51784 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USP11P51784 GNG5P2-201ENST00000372054 207 ntBASIC6.65□□□□□ -1.34
USP11P51784 RNU5A-6P-201ENST00000384136 116 ntBASIC6.65□□□□□ -1.34
USP11P51784 RNU6-1009P-201ENST00000390996 107 ntBASIC6.65□□□□□ -1.34
USP11P51784 RNU6-876P-201ENST00000391295 104 ntBASIC6.65□□□□□ -1.34
USP11P51784 AC007068.1-201ENST00000396690 844 ntBASIC6.65□□□□□ -1.34
USP11P51784 AL356057.2-201ENST00000403318 432 ntBASIC6.65□□□□□ -1.34
USP11P51784 RNU6-575P-201ENST00000411326 105 ntBASIC6.65□□□□□ -1.34
USP11P51784 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 AC126120.1-201ENST00000431082 470 ntBASIC6.65□□□□□ -1.34
USP11P51784 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
USP11P51784 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 AL157827.1-201ENST00000447622 132 ntBASIC6.65□□□□□ -1.34
USP11P51784 DPPA3P1-201ENST00000448050 469 ntBASIC6.65□□□□□ -1.34
USP11P51784 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.65□□□□□ -1.34
USP11P51784 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 PNPLA4P1-201ENST00000458328 305 ntBASIC6.65□□□□□ -1.34
USP11P51784 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 AC138409.2-202ENST00000507274 458 ntBASIC6.65□□□□□ -1.34
USP11P51784 AC117522.3-201ENST00000507974 584 ntBASIC6.65□□□□□ -1.34
USP11P51784 MTND3P22-201ENST00000510932 243 ntBASIC6.65□□□□□ -1.34
USP11P51784 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 GTF2IP11-201ENST00000526931 420 ntBASIC6.65□□□□□ -1.34
USP11P51784 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.65□□□□□ -1.34
USP11P51784 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.65□□□□□ -1.34
USP11P51784 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.65□□□□□ -1.34
USP11P51784 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.65□□□□□ -1.34
USP11P51784 AC015982.1-201ENST00000608113 465 ntBASIC6.65□□□□□ -1.34
USP11P51784 AC019278.1-201ENST00000623516 479 ntBASIC6.65□□□□□ -1.34
USP11P51784 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
USP11P51784 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.65□□□□□ -1.34
USP11P51784 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
USP11P51784 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USP11P51784 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USP11P51784 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USP11P51784 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.65□□□□□ -1.35
USP11P51784 WDR95P-201ENST00000425638 1542 ntBASIC6.65□□□□□ -1.35
USP11P51784 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
USP11P51784 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USP11P51784 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
USP11P51784 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 AL731532.1-201ENST00000623972 4236 ntBASIC6.64□□□□□ -1.35
USP11P51784 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 SNORA4.1-201ENST00000364263 144 ntBASIC6.64□□□□□ -1.35
USP11P51784 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 Y_RNA.453-201ENST00000384223 109 ntBASIC6.64□□□□□ -1.35
USP11P51784 ATP5HP3-201ENST00000396994 486 ntBASIC6.64□□□□□ -1.35
USP11P51784 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 HMGB3P18-201ENST00000406327 590 ntBASIC6.64□□□□□ -1.35
USP11P51784 CCNG1P1-201ENST00000406783 885 ntBASIC6.64□□□□□ -1.35
USP11P51784 RPS3AP2-201ENST00000407190 754 ntBASIC6.64□□□□□ -1.35
USP11P51784 EEF1A1P40-201ENST00000412883 573 ntBASIC6.64□□□□□ -1.35
USP11P51784 MRPL53P1-201ENST00000414323 319 ntBASIC6.64□□□□□ -1.35
USP11P51784 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 KCTD9P3-201ENST00000434597 1169 ntBASIC6.64□□□□□ -1.35
USP11P51784 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 AC005002.1-201ENST00000447458 540 ntBASIC6.64□□□□□ -1.35
USP11P51784 RPS4XP12-201ENST00000461747 709 ntBASIC6.64□□□□□ -1.35
USP11P51784 RPL5P24-201ENST00000463742 885 ntBASIC6.64□□□□□ -1.35
USP11P51784 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 AC093815.1-201ENST00000508637 280 ntBASIC6.64□□□□□ -1.35
USP11P51784 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.64□□□□□ -1.35
USP11P51784 MTCO1P35-201ENST00000515270 228 ntBASIC6.64□□□□□ -1.35
USP11P51784 snoU109.5-201ENST00000516231 132 ntBASIC6.64□□□□□ -1.35
USP11P51784 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 OR5AK3P-201ENST00000527486 1297 ntBASIC6.64□□□□□ -1.35
USP11P51784 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 AL163952.1-202ENST00000569625 600 ntBASIC6.64□□□□□ -1.35
USP11P51784 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 AL049634.3-201ENST00000604968 457 ntBASIC6.64□□□□□ -1.35
USP11P51784 FAM27E4-201ENST00000605259 342 ntBASIC6.64□□□□□ -1.35
USP11P51784 AC055876.5-201ENST00000605667 259 ntBASIC6.64□□□□□ -1.35
USP11P51784 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.64□□□□□ -1.35
USP11P51784 AP005137.2-201ENST00000609238 400 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms