Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 CDY3P-201ENST00000454543 1618 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC4.37□□□□□ -1.71
BRCA2P51587 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.37□□□□□ -1.71
BRCA2P51587 RNA5SP267-201ENST00000364893 126 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
BRCA2P51587 RANP9-201ENST00000519957 271 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 ATE1-AS1-202ENST00000636460 506 ntBASIC4.37□□□□□ -1.71
BRCA2P51587 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
BRCA2P51587 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
BRCA2P51587 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 AL592291.1-201ENST00000403830 352 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 MIR1911-201ENST00000410783 80 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AP000648.2-201ENST00000624182 404 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AF001550.2-201ENST00000636643 217 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
BRCA2P51587 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
BRCA2P51587 AL133268.1-201ENST00000405676 1401 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AL352979.3-201ENST00000553515 247 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AC006504.3-201ENST00000586818 523 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AC068722.2-201ENST00000618734 544 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.36□□□□□ -1.71
BRCA2P51587 ZNF402P-201ENST00000404435 3100 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 MIR1179-201ENST00000408703 91 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AL157385.1-201ENST00000446973 268 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 FTH1P24-201ENST00000503502 462 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.36□□□□□ -1.71
BRCA2P51587 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
BRCA2P51587 AC136601.2-201ENST00000604356 474 ntBASIC4.36□□□□□ -1.71
BRCA2P51587 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BRCA2P51587 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
BRCA2P51587 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
BRCA2P51587 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 HNRNPA1P54-201ENST00000411857 9714 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.35□□□□□ -1.71
BRCA2P51587 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.35□□□□□ -1.71
BRCA2P51587 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 EI24P3-201ENST00000399046 1062 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 RPS3AP46-201ENST00000448352 682 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 AC010285.3-201ENST00000511668 676 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.35□□□□□ -1.71
BRCA2P51587 AC119674.1-207ENST00000641355 633 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 AC093591.2-201ENST00000565254 3843 ntBASIC4.35□□□□□ -1.71
BRCA2P51587 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCA2P51587 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.35□□□□□ -1.71
BRCA2P51587 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
BRCA2P51587 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCA2P51587 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCA2P51587 PTP4A1P3-201ENST00000433661 420 ntBASIC4.34□□□□□ -1.71
BRCA2P51587 AL049874.2-201ENST00000492636 288 ntBASIC4.34□□□□□ -1.71
BRCA2P51587 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.34□□□□□ -1.71
BRCA2P51587 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.34□□□□□ -1.71
BRCA2P51587 AL713922.2-201ENST00000619384 716 ntBASIC4.34□□□□□ -1.71
BRCA2P51587 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.34□□□□□ -1.71
BRCA2P51587 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms