Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 AC068870.3-201ENST00000625077 2536 ntBASIC4.39□□□□□ -1.71
HTTP42858 RPS3AP46-201ENST00000448352 682 ntBASIC4.39□□□□□ -1.71
HTTP42858 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.39□□□□□ -1.71
HTTP42858 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.39□□□□□ -1.71
HTTP42858 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.39□□□□□ -1.71
HTTP42858 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 AL133268.1-201ENST00000405676 1401 ntBASIC4.38□□□□□ -1.71
HTTP42858 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HTTP42858 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC4.38□□□□□ -1.71
HTTP42858 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HTTP42858 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.38□□□□□ -1.71
HTTP42858 NMNAT1P2-201ENST00000435192 860 ntBASIC4.38□□□□□ -1.71
HTTP42858 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.38□□□□□ -1.71
HTTP42858 RPS3AP14-201ENST00000483907 780 ntBASIC4.38□□□□□ -1.71
HTTP42858 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.38□□□□□ -1.71
HTTP42858 SNX6P1-201ENST00000601728 1224 ntBASIC4.38□□□□□ -1.71
HTTP42858 AL391497.1-201ENST00000608671 547 ntBASIC4.38□□□□□ -1.71
HTTP42858 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 AL033543.1-201ENST00000623440 13454 ntBASIC4.38□□□□□ -1.71
HTTP42858 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 RNA5SP374-201ENST00000362939 125 ntBASIC4.38□□□□□ -1.71
HTTP42858 RNA5SP267-201ENST00000364893 126 ntBASIC4.38□□□□□ -1.71
HTTP42858 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.38□□□□□ -1.71
HTTP42858 AC097462.2-201ENST00000504623 481 ntBASIC4.38□□□□□ -1.71
HTTP42858 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HTTP42858 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HTTP42858 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HTTP42858 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 USP9YP36-201ENST00000424581 829 ntBASIC4.37□□□□□ -1.71
HTTP42858 DPY19L1P2-201ENST00000426647 915 ntBASIC4.37□□□□□ -1.71
HTTP42858 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.37□□□□□ -1.71
HTTP42858 USP9YP31-201ENST00000431405 881 ntBASIC4.37□□□□□ -1.71
HTTP42858 AC092641.1-201ENST00000440229 772 ntBASIC4.37□□□□□ -1.71
HTTP42858 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 AC119674.1-207ENST00000641355 633 ntBASIC4.37□□□□□ -1.71
HTTP42858 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HTTP42858 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 AL731532.2-201ENST00000623542 1953 ntBASIC4.37□□□□□ -1.71
HTTP42858 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 RAD23BP3-201ENST00000454157 1152 ntBASIC4.37□□□□□ -1.71
HTTP42858 CDY3P-201ENST00000454543 1618 ntBASIC4.37□□□□□ -1.71
HTTP42858 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HTTP42858 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HTTP42858 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 AC125494.3-201ENST00000602759 455 ntBASIC4.37□□□□□ -1.71
HTTP42858 SCARNA15.3-201ENST00000626315 122 ntBASIC4.37□□□□□ -1.71
HTTP42858 SCARNA4.1-201ENST00000628597 123 ntBASIC4.37□□□□□ -1.71
HTTP42858 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.37□□□□□ -1.71
HTTP42858 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.37□□□□□ -1.71
HTTP42858 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 HSFY4P-201ENST00000415994 1181 ntBASIC4.37□□□□□ -1.71
HTTP42858 Z97055.1-201ENST00000419730 712 ntBASIC4.37□□□□□ -1.71
HTTP42858 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 RPL5P23-201ENST00000496040 868 ntBASIC4.37□□□□□ -1.71
HTTP42858 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.37□□□□□ -1.71
HTTP42858 AC064801.1-201ENST00000612025 407 ntBASIC4.37□□□□□ -1.71
HTTP42858 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.37□□□□□ -1.71
HTTP42858 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
HTTP42858 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HTTP42858 AC011755.1-201ENST00000623763 2049 ntBASIC4.36□□□□□ -1.71
HTTP42858 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HTTP42858 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 AC093719.1-202ENST00000392735 373 ntBASIC4.36□□□□□ -1.71
HTTP42858 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.36□□□□□ -1.71
HTTP42858 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HTTP42858 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 DDX18P6-201ENST00000450119 1997 ntBASIC4.36□□□□□ -1.71
HTTP42858 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HTTP42858 DHX9P1-201ENST00000436565 3076 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms