Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC087565.3-202ENST00000642085 1603 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.33□□□□□ -1.72
SHMT2P34897 KPNA2P2-201ENST00000419546 1489 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHMT2P34897 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHMT2P34897 DHFRP5-201ENST00000406944 564 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.33□□□□□ -1.72
SHMT2P34897 XKRYP6-201ENST00000440468 1116 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 XKRYP3-201ENST00000442113 1116 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 RAD1P2-201ENST00000446414 663 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC013356.1-201ENST00000489027 564 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.33□□□□□ -1.72
SHMT2P34897 OR51K1P-201ENST00000510214 950 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.33□□□□□ -1.72
SHMT2P34897 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 RNU6-751P-201ENST00000516382 101 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.33□□□□□ -1.72
SHMT2P34897 SEC11B-201ENST00000518383 499 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC009643.1-201ENST00000532030 391 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC107918.3-201ENST00000533272 382 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.33□□□□□ -1.72
SHMT2P34897 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.33□□□□□ -1.72
SHMT2P34897 RPL26P30-202ENST00000602923 645 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AL356218.2-201ENST00000605264 187 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
SHMT2P34897 AC090948.1-201ENST00000607464 549 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AC009237.17-201ENST00000618111 748 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 OR2L1P-202ENST00000641567 1023 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
SHMT2P34897 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 AC025031.4-201ENST00000621248 3271 ntBASIC4.33□□□□□ -1.72
SHMT2P34897 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHMT2P34897 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 IGKV7-3-201ENST00000357453 298 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 RNU6-178P-201ENST00000384631 104 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 AC016397.1-201ENST00000412463 242 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 DYNLL1P7-201ENST00000429273 258 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 RPS27AP17-201ENST00000463344 455 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 AC053481.1-201ENST00000467217 306 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 AC090013.1-201ENST00000485147 480 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 RN7SL810P-201ENST00000493031 276 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.32□□□□□ -1.72
SHMT2P34897 PPBPP1-201ENST00000510807 373 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 C1GALT1P3-201ENST00000522049 819 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SHMT2P34897 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.32□□□□□ -1.72
SHMT2P34897 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 AC103792.1-201ENST00000603591 919 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHMT2P34897 AC139713.2-214ENST00000642059 1811 ntBASIC4.32□□□□□ -1.72
SHMT2P34897 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SHMT2P34897 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.31□□□□□ -1.72
SHMT2P34897 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.31□□□□□ -1.72
SHMT2P34897 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.31□□□□□ -1.72
SHMT2P34897 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHMT2P34897 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SHMT2P34897 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.31□□□□□ -1.72
SHMT2P34897 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHMT2P34897 RNU6-618P-201ENST00000363518 112 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms