Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL391834.1-201ENST00000609609 560 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 LINC01808-202ENST00000641680 1116 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 AC006484.1-201ENST00000435086 1884 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA13P31271 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA13P31271 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
HOXA13P31271 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 RNU1-83P-201ENST00000363426 164 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 SNORA62-201ENST00000365493 153 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA13P31271 HMGB1P10-201ENST00000395823 563 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RNU2-17P-201ENST00000410290 190 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RNU4-25P-201ENST00000410569 230 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RPL21P108-201ENST00000413857 481 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 TMSB10P2-201ENST00000416049 131 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 MTCO2P1-201ENST00000424648 477 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 UBE2D3P3-201ENST00000426992 425 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AL160175.1-201ENST00000428124 247 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 BX119904.1-201ENST00000432026 348 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 NMNAT1P2-201ENST00000435192 860 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXA13P31271 SDR42E1P3-201ENST00000438345 502 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXA13P31271 RNFT1P2-201ENST00000443064 757 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXA13P31271 AC011276.1-201ENST00000469688 323 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RPS27AP16-201ENST00000492222 470 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC104629.1-201ENST00000494226 508 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 RNU6-334P-201ENST00000517072 102 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC020937.1-201ENST00000519677 1013 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA13P31271 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXA13P31271 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 AC010487.1-201ENST00000594408 1172 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC002069.2-201ENST00000603580 883 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC144521.1-201ENST00000607148 956 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AP000240.1-201ENST00000609910 452 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AP004607.9-201ENST00000618202 316 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA13P31271 AC106858.1-201ENST00000637497 429 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 AC008079.2-201ENST00000623543 20396 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA13P31271 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 AL136520.1-201ENST00000600311 1322 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.18□□□□□ -1.58
HOXA13P31271 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA13P31271 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXA13P31271 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 HSPA8P17-201ENST00000427029 1382 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HOXA13P31271 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA13P31271 RNU1-130P-201ENST00000363930 160 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 MIR142-201ENST00000384835 87 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AC105402.1-201ENST00000413336 545 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 XKRYP4-201ENST00000414395 483 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 OR51A6P-201ENST00000418680 1004 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AL356387.2-201ENST00000422272 243 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXA13P31271 RPL21P43-201ENST00000425440 472 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 DPY19L1P2-201ENST00000426647 915 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXA13P31271 FHP1-201ENST00000442741 703 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 MRPL48P1-201ENST00000445390 636 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 MOB1AP2-201ENST00000446060 614 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 RPL23AP43-201ENST00000446445 471 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 XKRYP5-201ENST00000449659 483 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 AC015908.1-201ENST00000478739 476 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 AC112518.2-201ENST00000508565 425 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXA13P31271 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 NPM1P35-201ENST00000533043 868 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA13P31271 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA13P31271 SS18L2P2-201ENST00000583960 235 ntBASIC5.17□□□□□ -1.58
HOXA13P31271 AC005191.1-201ENST00000603950 358 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms