Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 STMN1P2-201ENST00000508435 439 ntBASIC4.72□□□□□ -1.65
CDH3P22223 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH3P22223 IGHV3-63-201ENST00000518422 341 ntBASIC4.72□□□□□ -1.65
CDH3P22223 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH3P22223 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 AC084757.1-201ENST00000559987 490 ntBASIC4.72□□□□□ -1.65
CDH3P22223 AC122134.1-202ENST00000569111 1201 ntBASIC4.72□□□□□ -1.65
CDH3P22223 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH3P22223 MIR4737-201ENST00000583979 81 ntBASIC4.72□□□□□ -1.65
CDH3P22223 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH3P22223 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH3P22223 AC007390.2-201ENST00000606229 3803 ntBASIC4.72□□□□□ -1.65
CDH3P22223 AC017076.1-201ENST00000607613 578 ntBASIC4.72□□□□□ -1.65
CDH3P22223 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH3P22223 SNX18P1Y-201ENST00000616231 511 ntBASIC4.72□□□□□ -1.65
CDH3P22223 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH3P22223 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.72□□□□□ -1.65
CDH3P22223 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH3P22223 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH3P22223 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH3P22223 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
CDH3P22223 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH3P22223 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH3P22223 AL672167.1-205ENST00000641112 3080 ntBASIC4.71□□□□□ -1.65
CDH3P22223 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 AC022893.2-201ENST00000564832 3296 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 RNA5SP87-201ENST00000384155 118 ntBASIC4.71□□□□□ -1.66
CDH3P22223 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH3P22223 TAF9BP2-201ENST00000400856 499 ntBASIC4.71□□□□□ -1.66
CDH3P22223 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 ATP5F1P6-201ENST00000402768 767 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 OR2X1P-201ENST00000421144 687 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC013410.2-201ENST00000422627 201 ntBASIC4.71□□□□□ -1.66
CDH3P22223 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
CDH3P22223 USP9YP9-201ENST00000429406 715 ntBASIC4.71□□□□□ -1.66
CDH3P22223 BX119904.1-201ENST00000432026 348 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AL512661.1-201ENST00000434586 1253 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 AC073052.1-201ENST00000440417 714 ntBASIC4.71□□□□□ -1.66
CDH3P22223 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH3P22223 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 AC010733.1-201ENST00000451515 401 ntBASIC4.71□□□□□ -1.66
CDH3P22223 RPL23AP23-201ENST00000452590 471 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC005008.1-201ENST00000456151 612 ntBASIC4.71□□□□□ -1.66
CDH3P22223 RPL23AP56-201ENST00000460778 453 ntBASIC4.71□□□□□ -1.66
CDH3P22223 METTL15P1-201ENST00000481421 1045 ntBASIC4.71□□□□□ -1.66
CDH3P22223 MTCO2P9-201ENST00000503214 694 ntBASIC4.71□□□□□ -1.66
CDH3P22223 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 OR7H2P-201ENST00000513483 306 ntBASIC4.71□□□□□ -1.66
CDH3P22223 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.71□□□□□ -1.66
CDH3P22223 CDH12P4-201ENST00000517835 295 ntBASIC4.71□□□□□ -1.66
CDH3P22223 CDH12P3-201ENST00000517935 295 ntBASIC4.71□□□□□ -1.66
CDH3P22223 CDH12P1-201ENST00000518435 295 ntBASIC4.71□□□□□ -1.66
CDH3P22223 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH3P22223 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 AP005119.2-201ENST00000579735 1105 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH3P22223 CBX3P2-202ENST00000583365 535 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC073137.1-201ENST00000605636 634 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AL136295.6-201ENST00000610486 658 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AL158196.1-201ENST00000616786 434 ntBASIC4.71□□□□□ -1.66
CDH3P22223 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 AL023881.1-201ENST00000621088 301 ntBASIC4.71□□□□□ -1.66
CDH3P22223 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH3P22223 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH3P22223 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDH3P22223 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH3P22223 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH3P22223 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH3P22223 RNA5SP191-201ENST00000362585 102 ntBASIC4.7□□□□□ -1.66
CDH3P22223 SNORA63.3-201ENST00000362682 132 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AL357515.1-201ENST00000402967 542 ntBASIC4.7□□□□□ -1.66
CDH3P22223 RNA5SP113-201ENST00000410486 84 ntBASIC4.7□□□□□ -1.66
CDH3P22223 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH3P22223 QRSL1P2-201ENST00000418582 964 ntBASIC4.7□□□□□ -1.66
CDH3P22223 SEC63P1-201ENST00000425785 1258 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH3P22223 PTP4A1P3-201ENST00000433661 420 ntBASIC4.7□□□□□ -1.66
CDH3P22223 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH3P22223 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms