Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VCLP18206 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 AC093311.1-201ENST00000506586 2021 ntBASIC4.72□□□□□ -1.65
VCLP18206 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.72□□□□□ -1.65
VCLP18206 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VCLP18206 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 U3.30-201ENST00000391308 210 ntBASIC4.72□□□□□ -1.65
VCLP18206 LAP3P1-201ENST00000403648 294 ntBASIC4.72□□□□□ -1.65
VCLP18206 UBE2V1P15-201ENST00000407776 448 ntBASIC4.72□□□□□ -1.65
VCLP18206 RNU4-74P-201ENST00000411280 161 ntBASIC4.72□□□□□ -1.65
VCLP18206 RNU6-603P-201ENST00000411403 107 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 AC004448.2-201ENST00000422360 586 ntBASIC4.72□□□□□ -1.65
VCLP18206 MTCO1P52-201ENST00000433928 531 ntBASIC4.72□□□□□ -1.65
VCLP18206 AL353597.2-202ENST00000434901 373 ntBASIC4.72□□□□□ -1.65
VCLP18206 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC004938.1-201ENST00000438468 308 ntBASIC4.72□□□□□ -1.65
VCLP18206 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.72□□□□□ -1.65
VCLP18206 AL513321.1-201ENST00000441175 761 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 AC005912.1-201ENST00000495392 255 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC105233.1-201ENST00000498840 781 ntBASIC4.72□□□□□ -1.65
VCLP18206 RNA5SP392-201ENST00000516905 112 ntBASIC4.72□□□□□ -1.65
VCLP18206 SOX5P1-201ENST00000524155 1127 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC004923.2-201ENST00000529649 369 ntBASIC4.72□□□□□ -1.65
VCLP18206 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 PDCD5P1-201ENST00000543528 309 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.72□□□□□ -1.65
VCLP18206 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.72□□□□□ -1.65
VCLP18206 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.72□□□□□ -1.65
VCLP18206 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.72□□□□□ -1.65
VCLP18206 AC010200.2-201ENST00000605098 235 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC073137.1-201ENST00000605636 634 ntBASIC4.72□□□□□ -1.65
VCLP18206 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.72□□□□□ -1.65
VCLP18206 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.72□□□□□ -1.65
VCLP18206 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC004232.3-201ENST00000622977 525 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC096656.1-201ENST00000623826 1364 ntBASIC4.72□□□□□ -1.65
VCLP18206 AC091046.3-201ENST00000631455 1574 ntBASIC4.72□□□□□ -1.65
VCLP18206 ZFRP1-201ENST00000457579 2970 ntBASIC4.72□□□□□ -1.65
VCLP18206 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCLP18206 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
VCLP18206 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
VCLP18206 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.65
VCLP18206 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VCLP18206 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.65
VCLP18206 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VCLP18206 PHKBP1-201ENST00000450951 1951 ntBASIC4.71□□□□□ -1.66
VCLP18206 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 AL445437.1-201ENST00000623157 3087 ntBASIC4.71□□□□□ -1.66
VCLP18206 AC103591.2-201ENST00000265259 766 ntBASIC4.71□□□□□ -1.66
VCLP18206 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 RNU1-20P-201ENST00000363314 162 ntBASIC4.71□□□□□ -1.66
VCLP18206 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VCLP18206 RPL37P18-201ENST00000411602 243 ntBASIC4.71□□□□□ -1.66
VCLP18206 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 EIF4A1P11-201ENST00000451239 222 ntBASIC4.71□□□□□ -1.66
VCLP18206 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.71□□□□□ -1.66
VCLP18206 AC005229.2-201ENST00000456995 399 ntBASIC4.71□□□□□ -1.66
VCLP18206 AC011005.3-201ENST00000491624 395 ntBASIC4.71□□□□□ -1.66
VCLP18206 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VCLP18206 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 AC025459.1-201ENST00000504072 156 ntBASIC4.71□□□□□ -1.66
VCLP18206 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 SETP12-201ENST00000514068 805 ntBASIC4.71□□□□□ -1.66
VCLP18206 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 CDH12P4-201ENST00000517835 295 ntBASIC4.71□□□□□ -1.66
VCLP18206 CDH12P3-201ENST00000517935 295 ntBASIC4.71□□□□□ -1.66
VCLP18206 CDH12P1-201ENST00000518435 295 ntBASIC4.71□□□□□ -1.66
VCLP18206 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
VCLP18206 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 AC233266.2-201ENST00000567067 528 ntBASIC4.71□□□□□ -1.66
VCLP18206 RN7SL802P-201ENST00000577858 299 ntBASIC4.71□□□□□ -1.66
VCLP18206 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.71□□□□□ -1.66
VCLP18206 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.71□□□□□ -1.66
VCLP18206 OR7A19P-201ENST00000608051 733 ntBASIC4.71□□□□□ -1.66
VCLP18206 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.71□□□□□ -1.66
VCLP18206 AL161616.1-201ENST00000611867 286 ntBASIC4.71□□□□□ -1.66
VCLP18206 AC016957.2-201ENST00000616998 848 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms