Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL603750.1-201ENST00000624216 1717 ntBASIC4.43□□□□□ -1.7
HLA-DOBP13765 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOBP13765 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOBP13765 AC109780.1-201ENST00000451768 1344 ntBASIC4.43□□□□□ -1.7
HLA-DOBP13765 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOBP13765 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DOBP13765 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOBP13765 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 MTND4P8-201ENST00000514997 1362 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 MTCO1P15-201ENST00000529569 1526 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 CCT8P1-201ENST00000413611 1657 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RNU6-636P-201ENST00000384598 107 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 MIR320B1-201ENST00000390209 79 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL035419.1-201ENST00000397037 564 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL136131.1-201ENST00000406079 803 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RNU2-22P-201ENST00000411266 212 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 BTF3P8-201ENST00000414577 526 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RLIMP2-201ENST00000427891 1563 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL137845.2-201ENST00000444292 988 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RN7SL177P-201ENST00000476596 299 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 MRPS33P2-201ENST00000507850 322 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 GTF2H2B-203ENST00000508065 1432 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 RN7SKP147-201ENST00000517154 244 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 IGLV2-28-201ENST00000520681 304 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 RARSP1-201ENST00000542842 1418 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC023050.2-201ENST00000544968 387 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC005412.1-201ENST00000580812 1049 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC104687.2-201ENST00000604442 342 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 MEMO1P5-201ENST00000604810 406 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL138478.1-201ENST00000612252 832 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL121612.2-201ENST00000612261 482 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AC009163.6-201ENST00000612367 342 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 STMN1P1-201ENST00000617809 440 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AP002782.1-201ENST00000623107 614 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 OR1S1-201ENST00000624470 978 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL355480.1-201ENST00000629041 99 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOBP13765 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOBP13765 LINC01355-201ENST00000566551 5444 ntBASIC4.42□□□□□ -1.7
HLA-DOBP13765 MTCO1P7-201ENST00000419523 1542 ntBASIC4.41□□□□□ -1.7
HLA-DOBP13765 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 AL672167.1-204ENST00000641875 3017 ntBASIC4.41□□□□□ -1.7
HLA-DOBP13765 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 PCAT14-202ENST00000627127 3935 ntBASIC4.41□□□□□ -1.7
HLA-DOBP13765 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DOBP13765 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 RNU4-4P-201ENST00000364588 130 ntBASIC4.41□□□□□ -1.7
HLA-DOBP13765 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOBP13765 AL357515.1-201ENST00000402967 542 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms