Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL160290.3-201ENST00000604869 165 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.8□□□□□ -1.8
FREM3P0C091 AC112484.5-201ENST00000624189 228 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 RNA5SP399-201ENST00000364003 117 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 MIR1193-201ENST00000408109 78 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 CYCSP19-201ENST00000411715 316 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 GNG5P5-201ENST00000420444 220 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.8□□□□□ -1.8
FREM3P0C091 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 AC073587.1-201ENST00000447093 876 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.8□□□□□ -1.8
FREM3P0C091 PSMB7P1-201ENST00000556349 514 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.8□□□□□ -1.8
FREM3P0C091 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.8□□□□□ -1.8
FREM3P0C091 SNX18P1Y-201ENST00000616231 511 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.8□□□□□ -1.8
FREM3P0C091 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FREM3P0C091 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FREM3P0C091 MFSD8-220ENST00000641243 1422 ntBASIC3.8□□□□□ -1.8
FREM3P0C091 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FREM3P0C091 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 ZNF962P-201ENST00000443465 3140 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC116667.1-201ENST00000604855 2072 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FREM3P0C091 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 RN7SL303P-201ENST00000469773 251 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 FTH1P21-201ENST00000512179 511 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.79□□□□□ -1.8
FREM3P0C091 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.79□□□□□ -1.8
FREM3P0C091 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
FREM3P0C091 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.79□□□□□ -1.8
FREM3P0C091 AC022916.3-201ENST00000592961 742 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC023043.4-201ENST00000612081 449 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 OR51C1P-202ENST00000641159 1444 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
FREM3P0C091 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FREM3P0C091 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 RNU1-108P-201ENST00000362556 161 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.79□□□□□ -1.8
FREM3P0C091 AL445189.1-201ENST00000405722 338 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 ARAFP2-201ENST00000440565 559 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC022795.1-201ENST00000473808 480 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.79□□□□□ -1.8
FREM3P0C091 SETP1-201ENST00000556014 845 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 AC025884.1-201ENST00000556034 378 ntBASIC3.79□□□□□ -1.8
FREM3P0C091 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.79□□□□□ -1.8
FREM3P0C091 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 MAPK10-304ENST00000641341 3984 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.78□□□□□ -1.8
FREM3P0C091 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.78□□□□□ -1.8
FREM3P0C091 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.78□□□□□ -1.8
FREM3P0C091 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 HMGB3P19-201ENST00000403971 560 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FREM3P0C091 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
FREM3P0C091 HMGB1P23-201ENST00000518743 568 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.78□□□□□ -1.8
FREM3P0C091 AC024941.1-201ENST00000612250 334 ntBASIC3.78□□□□□ -1.8
FREM3P0C091 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.78□□□□□ -1.8
FREM3P0C091 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms