Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 RNU6-146P-201ENST00000384602 108 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AL607077.1-201ENST00000401718 499 ntBASIC4.77□□□□□ -1.65
TPM1P09493 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 RPL12P11-201ENST00000439970 501 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 HMGB1P16-201ENST00000447155 540 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 RPL23AP71-201ENST00000470966 469 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AL592156.1-201ENST00000508758 304 ntBASIC4.77□□□□□ -1.65
TPM1P09493 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 AP006289.1-201ENST00000538089 277 ntBASIC4.77□□□□□ -1.65
TPM1P09493 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.77□□□□□ -1.65
TPM1P09493 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.77□□□□□ -1.65
TPM1P09493 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.77□□□□□ -1.65
TPM1P09493 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 AC073091.2-201ENST00000603205 907 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AC012603.1-201ENST00000606424 528 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.77□□□□□ -1.65
TPM1P09493 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.77□□□□□ -1.65
TPM1P09493 OR8A1-204ENST00000642111 1145 ntBASIC4.77□□□□□ -1.65
TPM1P09493 AL049555.1-201ENST00000562834 1933 ntBASIC4.77□□□□□ -1.65
TPM1P09493 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TPM1P09493 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TPM1P09493 AC114546.3-201ENST00000623582 1734 ntBASIC4.77□□□□□ -1.65
TPM1P09493 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 C4BPAP1-201ENST00000415474 1893 ntBASIC4.77□□□□□ -1.65
TPM1P09493 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TPM1P09493 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TPM1P09493 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TPM1P09493 Z73965.1-201ENST00000623412 2297 ntBASIC4.76□□□□□ -1.65
TPM1P09493 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.76□□□□□ -1.65
TPM1P09493 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TPM1P09493 AC009229.4-201ENST00000623854 1947 ntBASIC4.76□□□□□ -1.65
TPM1P09493 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.76□□□□□ -1.65
TPM1P09493 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TPM1P09493 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TPM1P09493 RN7SKP56-201ENST00000410513 331 ntBASIC4.76□□□□□ -1.65
TPM1P09493 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 CYP4F29P-201ENST00000420685 446 ntBASIC4.76□□□□□ -1.65
TPM1P09493 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
TPM1P09493 RPEP2-201ENST00000432149 701 ntBASIC4.76□□□□□ -1.65
TPM1P09493 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 PSMD10P3-201ENST00000437000 448 ntBASIC4.76□□□□□ -1.65
TPM1P09493 YWHAZP2-201ENST00000440317 728 ntBASIC4.76□□□□□ -1.65
TPM1P09493 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.76□□□□□ -1.65
TPM1P09493 MTND2P25-201ENST00000449028 610 ntBASIC4.76□□□□□ -1.65
TPM1P09493 HMGB3P22-202ENST00000451823 572 ntBASIC4.76□□□□□ -1.65
TPM1P09493 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TPM1P09493 HAUS1P1-201ENST00000505275 832 ntBASIC4.76□□□□□ -1.65
TPM1P09493 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.76□□□□□ -1.65
TPM1P09493 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.76□□□□□ -1.65
TPM1P09493 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
TPM1P09493 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.76□□□□□ -1.65
TPM1P09493 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.76□□□□□ -1.65
TPM1P09493 AL031320.1-201ENST00000604177 357 ntBASIC4.76□□□□□ -1.65
TPM1P09493 SNORA35B-201ENST00000607417 129 ntBASIC4.76□□□□□ -1.65
TPM1P09493 MIR6826-201ENST00000617808 98 ntBASIC4.76□□□□□ -1.65
TPM1P09493 AP006248.2-201ENST00000623309 592 ntBASIC4.76□□□□□ -1.65
TPM1P09493 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.76□□□□□ -1.65
TPM1P09493 OR2L1P-202ENST00000641567 1023 ntBASIC4.76□□□□□ -1.65
TPM1P09493 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TPM1P09493 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TPM1P09493 AC083899.2-201ENST00000423285 1376 ntBASIC4.76□□□□□ -1.65
TPM1P09493 AC007390.2-201ENST00000606229 3803 ntBASIC4.76□□□□□ -1.65
TPM1P09493 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.75□□□□□ -1.65
TPM1P09493 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.75□□□□□ -1.65
TPM1P09493 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TPM1P09493 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TPM1P09493 RN7SKP269-201ENST00000365545 319 ntBASIC4.75□□□□□ -1.65
TPM1P09493 MIR298-201ENST00000401212 88 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.75□□□□□ -1.65
TPM1P09493 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC114495.1-201ENST00000441274 436 ntBASIC4.75□□□□□ -1.65
TPM1P09493 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.75□□□□□ -1.65
TPM1P09493 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.75□□□□□ -1.65
TPM1P09493 RPL7AP6-201ENST00000477943 801 ntBASIC4.75□□□□□ -1.65
TPM1P09493 RN7SL727P-201ENST00000482164 296 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC008953.1-201ENST00000497334 318 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.75□□□□□ -1.65
TPM1P09493 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.75□□□□□ -1.65
TPM1P09493 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TPM1P09493 OR5AZ1P-201ENST00000527448 943 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC068714.1-201ENST00000559623 800 ntBASIC4.75□□□□□ -1.65
TPM1P09493 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.75□□□□□ -1.65
TPM1P09493 AC090953.1-201ENST00000604305 1092 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms