Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC111000.6-201ENST00000514471 709 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 RN7SKP289-201ENST00000517244 295 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.92□□□□□ -1.78
SPTA1P02549 AL031985.2-201ENST00000600955 480 ntBASIC3.92□□□□□ -1.78
SPTA1P02549 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPTA1P02549 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SPTA1P02549 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SPTA1P02549 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.91□□□□□ -1.78
SPTA1P02549 AP005432.1-201ENST00000580891 3485 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 AC016588.2-201ENST00000632484 3021 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 RNU4-64P-201ENST00000410795 131 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 NPM1P26-201ENST00000426339 738 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 TEX41-206ENST00000432608 661 ntTSL 3 BASIC3.91□□□□□ -1.78
SPTA1P02549 RPS29P7-201ENST00000439662 171 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.91□□□□□ -1.78
SPTA1P02549 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.91□□□□□ -1.78
SPTA1P02549 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.91□□□□□ -1.78
SPTA1P02549 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.91□□□□□ -1.78
SPTA1P02549 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
SPTA1P02549 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SPTA1P02549 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.91□□□□□ -1.78
SPTA1P02549 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SPTA1P02549 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 PCAT14-202ENST00000627127 3935 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 Y_RNA.510-201ENST00000384511 114 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.91□□□□□ -1.78
SPTA1P02549 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 AL512326.1-201ENST00000443050 721 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SPTA1P02549 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.91□□□□□ -1.78
SPTA1P02549 RPS20P4-201ENST00000461659 355 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 RPL5P24-201ENST00000463742 885 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 AC010460.1-201ENST00000507087 466 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 RNA5SP73-201ENST00000516744 108 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.91□□□□□ -1.78
SPTA1P02549 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.91□□□□□ -1.78
SPTA1P02549 AL034408.1-202ENST00000636088 415 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.91□□□□□ -1.78
SPTA1P02549 AL355852.1-201ENST00000454081 1771 ntBASIC3.91□□□□□ -1.78
SPTA1P02549 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SPTA1P02549 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SPTA1P02549 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.9□□□□□ -1.78
SPTA1P02549 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SPTA1P02549 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SPTA1P02549 RNA5SP124-201ENST00000362739 110 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 AC138761.5-201ENST00000433967 325 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.9□□□□□ -1.78
SPTA1P02549 MTND6P6-201ENST00000478031 263 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.9□□□□□ -1.78
SPTA1P02549 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.9□□□□□ -1.78
SPTA1P02549 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.9□□□□□ -1.78
SPTA1P02549 AL442067.2-201ENST00000614033 363 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 AC026367.3-201ENST00000619032 590 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 AC000095.2-202ENST00000637415 154 ntBASIC3.9□□□□□ -1.78
SPTA1P02549 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SPTA1P02549 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SPTA1P02549 MFSD8-242ENST00000641690 4199 ntBASIC3.9□□□□□ -1.79
SPTA1P02549 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.9□□□□□ -1.79
SPTA1P02549 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.9□□□□□ -1.79
SPTA1P02549 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.9□□□□□ -1.79
SPTA1P02549 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.9□□□□□ -1.79
SPTA1P02549 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
SPTA1P02549 AL157831.1-201ENST00000426134 473 ntBASIC3.9□□□□□ -1.79
SPTA1P02549 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.9□□□□□ -1.79
SPTA1P02549 RAB9AP1-201ENST00000449393 573 ntBASIC3.9□□□□□ -1.79
SPTA1P02549 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SPTA1P02549 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.9□□□□□ -1.79
SPTA1P02549 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.9□□□□□ -1.79
SPTA1P02549 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.9□□□□□ -1.79
SPTA1P02549 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
SPTA1P02549 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPTA1P02549 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 AP000357.1-201ENST00000409926 1165 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 AC013429.2-201ENST00000418798 781 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPTA1P02549 AJ239321.1-201ENST00000424255 564 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 NANOGP10-201ENST00000453325 895 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.89□□□□□ -1.79
SPTA1P02549 ATP5G1P3-201ENST00000463301 410 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms