Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC108032.1-201ENST00000416706 207 ntBASIC5□□□□□ -1.61
COL2A1P02458 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 CYCSP10-201ENST00000417973 294 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC115285.1-201ENST00000424879 736 ntBASIC5□□□□□ -1.61
COL2A1P02458 PPIAP13-201ENST00000434706 478 ntBASIC5□□□□□ -1.61
COL2A1P02458 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5□□□□□ -1.61
COL2A1P02458 BNIP3P41-201ENST00000503774 571 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5□□□□□ -1.61
COL2A1P02458 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 AL160281.1-201ENST00000605307 311 ntBASIC5□□□□□ -1.61
COL2A1P02458 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 AC244100.1-202ENST00000621554 382 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC112484.5-201ENST00000624189 228 ntBASIC5□□□□□ -1.61
COL2A1P02458 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
COL2A1P02458 A2MP1-204ENST00000566278 4130 ntBASIC5□□□□□ -1.61
COL2A1P02458 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 AC233289.1-201ENST00000403700 508 ntBASIC5□□□□□ -1.61
COL2A1P02458 RNU6ATAC-201ENST00000408749 126 ntBASIC5□□□□□ -1.61
COL2A1P02458 USP9YP19-201ENST00000412165 485 ntBASIC5□□□□□ -1.61
COL2A1P02458 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 MTCO1P54-201ENST00000430139 712 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 AL050321.1-201ENST00000432363 400 ntBASIC5□□□□□ -1.61
COL2A1P02458 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5□□□□□ -1.61
COL2A1P02458 VN1R105P-201ENST00000486595 910 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5□□□□□ -1.61
COL2A1P02458 FTH1P21-201ENST00000512179 511 ntBASIC5□□□□□ -1.61
COL2A1P02458 MTND4LP31-201ENST00000514859 294 ntBASIC5□□□□□ -1.61
COL2A1P02458 AP003168.1-201ENST00000530091 307 ntBASIC5□□□□□ -1.61
COL2A1P02458 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5□□□□□ -1.61
COL2A1P02458 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5□□□□□ -1.61
COL2A1P02458 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5□□□□□ -1.61
COL2A1P02458 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL2A1P02458 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL2A1P02458 TCP11X1-202ENST00000622971 1372 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.99□□□□□ -1.61
COL2A1P02458 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
COL2A1P02458 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
COL2A1P02458 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 RNA5SP22-201ENST00000365393 109 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 RNU11-4P-201ENST00000391149 133 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 AP000357.1-201ENST00000409926 1165 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.99□□□□□ -1.61
COL2A1P02458 AC018644.1-201ENST00000429934 551 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.99□□□□□ -1.61
COL2A1P02458 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.99□□□□□ -1.61
COL2A1P02458 ABCF2P2-201ENST00000450549 296 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 SNORA59A-201ENST00000459326 152 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 CAB39P1-201ENST00000502277 460 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL2A1P02458 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.99□□□□□ -1.61
COL2A1P02458 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.99□□□□□ -1.61
COL2A1P02458 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.99□□□□□ -1.61
COL2A1P02458 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.99□□□□□ -1.61
COL2A1P02458 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL2A1P02458 AC015871.5-202ENST00000623252 701 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 AL356121.2-201ENST00000624715 780 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.99□□□□□ -1.61
COL2A1P02458 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 AC032011.1-201ENST00000611703 1549 ntBASIC4.99□□□□□ -1.61
COL2A1P02458 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL2A1P02458 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL2A1P02458 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.98□□□□□ -1.61
COL2A1P02458 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL2A1P02458 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.98□□□□□ -1.61
COL2A1P02458 CASC19-204ENST00000641001 2055 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AC112198.2-201ENST00000426589 6996 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AP001157.1-201ENST00000550837 2339 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL2A1P02458 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 RNA5SP513-201ENST00000364648 118 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms