Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC011453.2-201ENST00000603737 729 ntBASIC5.34□□□□□ -1.55
VPS4BO75351 AC080013.3-201ENST00000606839 578 ntBASIC5.34□□□□□ -1.55
VPS4BO75351 AL451049.1-201ENST00000608672 497 ntBASIC5.34□□□□□ -1.55
VPS4BO75351 AP000238.1-201ENST00000608759 426 ntBASIC5.34□□□□□ -1.55
VPS4BO75351 Mico1.1-201ENST00000611698 204 ntBASIC5.34□□□□□ -1.55
VPS4BO75351 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4BO75351 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS4BO75351 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VPS4BO75351 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
VPS4BO75351 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS4BO75351 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS4BO75351 AL353796.1-201ENST00000561542 3241 ntBASIC5.34□□□□□ -1.56
VPS4BO75351 AP005901.5-201ENST00000545779 1796 ntBASIC5.34□□□□□ -1.56
VPS4BO75351 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.34□□□□□ -1.56
VPS4BO75351 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
VPS4BO75351 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS4BO75351 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
VPS4BO75351 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS4BO75351 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 OR1L6-202ENST00000373684 1044 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC009804.1-201ENST00000400949 179 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 HNRNPDP2-201ENST00000406475 478 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 RN7SKP222-201ENST00000410651 315 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AL596448.1-201ENST00000415024 392 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 RPL23AP27-201ENST00000415161 451 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 HMGN2P27-201ENST00000427352 270 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 HMGB1P45-201ENST00000435986 653 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC234064.1-201ENST00000436312 247 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 YWHAZP7-201ENST00000436906 631 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 RPS26P30-201ENST00000443431 335 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 HMGB1P48-201ENST00000446155 598 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 GAPDHP14-201ENST00000450472 937 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC091685.2-201ENST00000454924 864 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC011225.1-201ENST00000457751 369 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 RN7SL72P-201ENST00000460697 269 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC100832.1-201ENST00000471945 383 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 RPS3AP43-201ENST00000479743 781 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 RN7SL547P-201ENST00000490793 290 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC016559.2-201ENST00000510759 359 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC023632.1-201ENST00000518463 375 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC084824.1-201ENST00000550917 1005 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AL359219.2-201ENST00000555184 348 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC044913.1-201ENST00000557200 430 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS4BO75351 VN1R88P-201ENST00000596787 292 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC104785.1-201ENST00000603220 588 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC091932.2-201ENST00000623014 291 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AL157770.1-201ENST00000623049 439 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC079248.2-201ENST00000623779 326 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC145207.9-201ENST00000623802 325 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC073869.8-201ENST00000641806 335 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4BO75351 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC019072.1-201ENST00000604535 1551 ntBASIC5.33□□□□□ -1.56
VPS4BO75351 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4BO75351 AC104623.2-202ENST00000623477 4002 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS4BO75351 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 AC103591.2-201ENST00000265259 766 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms