Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-298P-201ENST00000390888 96 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AL603865.2-201ENST00000401679 213 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AL590290.1-201ENST00000405336 380 ntBASIC4.54□□□□□ -1.68
SSX4O60224 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.54□□□□□ -1.68
SSX4O60224 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 AC092745.2-202ENST00000411880 369 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC246680.2-201ENST00000422106 389 ntBASIC4.54□□□□□ -1.68
SSX4O60224 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 CDY14P-201ENST00000431260 1014 ntBASIC4.54□□□□□ -1.68
SSX4O60224 YWHAEP5-201ENST00000431545 765 ntBASIC4.54□□□□□ -1.68
SSX4O60224 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 PSMD10P3-201ENST00000437000 448 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC006466.1-201ENST00000438721 289 ntBASIC4.54□□□□□ -1.68
SSX4O60224 ELOCP10-201ENST00000440624 327 ntBASIC4.54□□□□□ -1.68
SSX4O60224 CDY12P-201ENST00000440679 1015 ntBASIC4.54□□□□□ -1.68
SSX4O60224 TPTE2P6-202ENST00000445572 1007 ntBASIC4.54□□□□□ -1.68
SSX4O60224 CDY13P-201ENST00000445813 1015 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC099063.2-201ENST00000446360 662 ntBASIC4.54□□□□□ -1.68
SSX4O60224 TRY2P-201ENST00000448860 689 ntBASIC4.54□□□□□ -1.68
SSX4O60224 OR51B8P-201ENST00000449892 769 ntBASIC4.54□□□□□ -1.68
SSX4O60224 CDY23P-201ENST00000451661 1014 ntBASIC4.54□□□□□ -1.68
SSX4O60224 TVP23BP2-201ENST00000455082 615 ntBASIC4.54□□□□□ -1.68
SSX4O60224 snoU13.20-201ENST00000459180 104 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC009127.1-201ENST00000467090 155 ntBASIC4.54□□□□□ -1.68
SSX4O60224 TRBV8-2-201ENST00000475637 270 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RPS4XP20-201ENST00000505751 772 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 AC109464.1-201ENST00000511091 819 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 RN7SKP46-201ENST00000515942 234 ntBASIC4.54□□□□□ -1.68
SSX4O60224 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 OR5D15P-201ENST00000531671 942 ntBASIC4.54□□□□□ -1.68
SSX4O60224 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.54□□□□□ -1.68
SSX4O60224 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC092490.3-201ENST00000545370 572 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.54□□□□□ -1.68
SSX4O60224 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RN7SL52P-201ENST00000584271 284 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.54□□□□□ -1.68
SSX4O60224 AL606834.3-201ENST00000602615 496 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC091057.3-201ENST00000602684 733 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC095055.1-201ENST00000603472 1113 ntBASIC4.54□□□□□ -1.68
SSX4O60224 RNF138P2-201ENST00000603490 592 ntBASIC4.54□□□□□ -1.68
SSX4O60224 ELOCP34-201ENST00000604436 327 ntBASIC4.54□□□□□ -1.68
SSX4O60224 IMMP1LP1-201ENST00000605170 488 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AC018754.1-201ENST00000607486 925 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AP003400.3-201ENST00000624904 346 ntBASIC4.54□□□□□ -1.68
SSX4O60224 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SSX4O60224 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 AL596275.2-204ENST00000641628 552 ntBASIC4.54□□□□□ -1.68
SSX4O60224 LINC01739-205ENST00000641890 573 ntBASIC4.54□□□□□ -1.68
SSX4O60224 AL596275.2-206ENST00000641957 626 ntBASIC4.54□□□□□ -1.68
SSX4O60224 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 AC010329.2-201ENST00000595195 2737 ntBASIC4.54□□□□□ -1.68
SSX4O60224 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 AC100871.1-201ENST00000507871 1456 ntBASIC4.54□□□□□ -1.68
SSX4O60224 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX4O60224 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX4O60224 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX4O60224 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 AC023421.1-201ENST00000590535 1785 ntBASIC4.53□□□□□ -1.68
SSX4O60224 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
SSX4O60224 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX4O60224 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSX4O60224 DNAJC19P6-201ENST00000401853 280 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX4O60224 TRGV6-201ENST00000417928 299 ntBASIC4.53□□□□□ -1.68
SSX4O60224 RBMY2KP-201ENST00000418221 992 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX4O60224 RBMY2QP-201ENST00000429799 1147 ntBASIC4.53□□□□□ -1.68
SSX4O60224 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX4O60224 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 Z80107.2-201ENST00000445127 392 ntBASIC4.53□□□□□ -1.68
SSX4O60224 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.53□□□□□ -1.68
SSX4O60224 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX4O60224 GAPDHP25-201ENST00000447061 1001 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX4O60224 AC092754.1-201ENST00000472975 479 ntBASIC4.53□□□□□ -1.68
SSX4O60224 DEFB109F-201ENST00000491870 277 ntBASIC4.53□□□□□ -1.68
SSX4O60224 AC073358.1-201ENST00000505671 684 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms