Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 SNORD91B-202ENST00000608459 222 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 AC019278.1-201ENST00000623516 479 ntBASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
SMIM28A0A1B0GU29 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 RNU1-13P-201ENST00000384499 162 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 RN7SKP33-201ENST00000410942 340 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AL121878.1-201ENST00000418638 859 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 UBTFL3-201ENST00000418934 1024 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 UBTFL6-201ENST00000477929 1024 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC098583.1-201ENST00000480875 255 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC104164.2-201ENST00000496953 495 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 PGBD4P4-201ENST00000509673 613 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC008759.1-201ENST00000589783 983 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC090953.1-201ENST00000604305 1092 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 AP001642.1-201ENST00000624727 2117 ntBASIC4.57□□□□□ -1.68
SMIM28A0A1B0GU29 MTCO1P8-201ENST00000416914 1523 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 EIF4A1P3-201ENST00000411521 244 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 CEACAMP8-201ENST00000413902 580 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AL590806.1-201ENST00000415818 853 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 ABCF2P2-201ENST00000450549 296 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC012158.1-204ENST00000483430 465 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 RPL21P7-201ENST00000557463 483 ntBASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMIM28A0A1B0GU29 AC091046.3-201ENST00000631455 1574 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms