Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 IFNL4P1-201ENST00000607083 540 ntBASIC20.66■□□□□ 0.9
CHD7Q9P2D1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD7Q9P2D1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 AC092329.2-201ENST00000598402 547 ntBASIC20.65■□□□□ 0.9
CHD7Q9P2D1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 AL645929.1-201ENST00000420084 975 ntBASIC20.65■□□□□ 0.9
CHD7Q9P2D1 RNA5SP419-201ENST00000515908 135 ntBASIC20.65■□□□□ 0.9
CHD7Q9P2D1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD7Q9P2D1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD7Q9P2D1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.64■□□□□ 0.9
CHD7Q9P2D1 AL049796.1-201ENST00000565336 1766 ntBASIC20.64■□□□□ 0.9
CHD7Q9P2D1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD7Q9P2D1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD7Q9P2D1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CHD7Q9P2D1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 FAAHP1-202ENST00000446499 1238 ntBASIC20.64■□□□□ 0.89
CHD7Q9P2D1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CHD7Q9P2D1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 SLC25A6P4-201ENST00000586535 553 ntBASIC20.63■□□□□ 0.89
CHD7Q9P2D1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 AC016734.2-201ENST00000624325 1377 ntBASIC20.63■□□□□ 0.89
CHD7Q9P2D1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD7Q9P2D1 BX119927.1-201ENST00000636596 1552 ntBASIC20.63■□□□□ 0.89
CHD7Q9P2D1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 AC121338.2-201ENST00000622535 1744 ntBASIC20.62■□□□□ 0.89
CHD7Q9P2D1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD7Q9P2D1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms