Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 FAM86EP-206ENST00000510506 987 ntBASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 AL121956.5-201ENST00000625261 221 ntBASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDLIM7Q9NR12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 AL450487.1-201ENST00000426799 995 ntBASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 COX11P1-201ENST00000489116 835 ntBASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 AP000692.2-201ENST00000608391 879 ntBASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 AC131212.4-201ENST00000623606 975 ntBASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM7Q9NR12 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 AC116562.4-202ENST00000641738 218 ntBASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM7Q9NR12 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PDLIM7Q9NR12 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.77■■□□□ 1.07
PDLIM7Q9NR12 TMEM179-206ENST00000616017 1645 ntBASIC21.77■■□□□ 1.07
PDLIM7Q9NR12 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 AC130371.2-201ENST00000619443 611 ntBASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 AC093458.2-201ENST00000623150 629 ntBASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 AC112907.3-201ENST00000577781 2400 ntBASIC21.76■■□□□ 1.07
PDLIM7Q9NR12 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 IER3-202ENST00000376377 1350 ntBASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms