Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 AC022616.7-201ENST00000525383 220 ntBASIC22.96■■□□□ 1.27
DDX4Q9NQI0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 AC087388.1-201ENST00000571370 1112 ntBASIC22.96■■□□□ 1.27
DDX4Q9NQI0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 TCF3P1-201ENST00000423021 1937 ntBASIC22.96■■□□□ 1.27
DDX4Q9NQI0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
DDX4Q9NQI0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
DDX4Q9NQI0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 KRT8P11-201ENST00000409686 1436 ntBASIC22.95■■□□□ 1.26
DDX4Q9NQI0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
DDX4Q9NQI0 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.94■■□□□ 1.26
DDX4Q9NQI0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 TSPY17P-201ENST00000450329 467 ntBASIC22.94■■□□□ 1.26
DDX4Q9NQI0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 AC112907.3-201ENST00000577781 2400 ntBASIC22.94■■□□□ 1.26
DDX4Q9NQI0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX4Q9NQI0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 YBX1P2-201ENST00000489612 999 ntBASIC22.93■■□□□ 1.26
DDX4Q9NQI0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX4Q9NQI0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 CA15P1-201ENST00000481698 905 ntBASIC22.92■■□□□ 1.26
DDX4Q9NQI0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 AC141257.4-201ENST00000634557 245 ntBASIC22.92■■□□□ 1.26
DDX4Q9NQI0 AC136944.6-201ENST00000634818 245 ntBASIC22.92■■□□□ 1.26
DDX4Q9NQI0 MYC-208ENST00000641036 567 ntBASIC22.92■■□□□ 1.26
DDX4Q9NQI0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX4Q9NQI0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms