Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 TMEM179-206ENST00000616017 1645 ntBASIC20.06■□□□□ 0.8
BRD9Q9H8M2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 TSPY5P-201ENST00000426936 936 ntBASIC20.06■□□□□ 0.8
BRD9Q9H8M2 AC007663.1-201ENST00000438948 1240 ntBASIC20.06■□□□□ 0.8
BRD9Q9H8M2 COX11P1-201ENST00000489116 835 ntBASIC20.06■□□□□ 0.8
BRD9Q9H8M2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.06■□□□□ 0.8
BRD9Q9H8M2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.05■□□□□ 0.8
BRD9Q9H8M2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRD9Q9H8M2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 MYC-208ENST00000641036 567 ntBASIC20.04■□□□□ 0.8
BRD9Q9H8M2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRD9Q9H8M2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 AC092667.1-201ENST00000434301 2586 ntBASIC20.03■□□□□ 0.8
BRD9Q9H8M2 KRT8P8-201ENST00000434750 1448 ntBASIC20.03■□□□□ 0.8
BRD9Q9H8M2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 AL031133.1-201ENST00000406807 723 ntBASIC20.03■□□□□ 0.8
BRD9Q9H8M2 TSPY17P-201ENST00000450329 467 ntBASIC20.03■□□□□ 0.8
BRD9Q9H8M2 Z85996.1-201ENST00000494644 937 ntBASIC20.03■□□□□ 0.8
BRD9Q9H8M2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.03■□□□□ 0.8
BRD9Q9H8M2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms