Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 HYMAI.1-201ENST00000620949 238 ntBASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 LINC01465-201ENST00000408887 1940 ntBASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.66■■□□□ 1.38
RTFDC1Q9BY42 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 AC083849.1-201ENST00000615227 514 ntBASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTFDC1Q9BY42 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTFDC1Q9BY42 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTFDC1Q9BY42 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 HCG4P8-203ENST00000443049 980 ntBASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 CLEC4GP1-201ENST00000596555 870 ntBASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 AC069148.1-201ENST00000608741 768 ntBASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTFDC1Q9BY42 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 FEM1AP1-201ENST00000431297 1995 ntBASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 AP000523.1-201ENST00000398242 1049 ntBASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 NEK4P2-201ENST00000580004 1012 ntBASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 AL137060.1-201ENST00000618151 2648 ntBASIC23.63■■□□□ 1.37
RTFDC1Q9BY42 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RTFDC1Q9BY42 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms