Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CDCA3Q99618 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCA3Q99618 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCA3Q99618 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCA3Q99618 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 LINC01465-201ENST00000408887 1940 ntBASIC20.27■□□□□ 0.84
CDCA3Q99618 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCA3Q99618 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCA3Q99618 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDCA3Q99618 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA3Q99618 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA3Q99618 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA3Q99618 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCA3Q99618 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA3Q99618 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCA3Q99618 KRT8P11-201ENST00000409686 1436 ntBASIC20.26■□□□□ 0.83
CDCA3Q99618 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCA3Q99618 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CDCA3Q99618 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDCA3Q99618 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDCA3Q99618 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDCA3Q99618 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA3Q99618 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 SPDYE15P-201ENST00000424157 909 ntBASIC20.25■□□□□ 0.83
CDCA3Q99618 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCA3Q99618 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.25■□□□□ 0.83
CDCA3Q99618 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCA3Q99618 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.25■□□□□ 0.83
CDCA3Q99618 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCA3Q99618 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCA3Q99618 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCA3Q99618 NPAP1P7-201ENST00000613027 823 ntBASIC20.25■□□□□ 0.83
CDCA3Q99618 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDCA3Q99618 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCA3Q99618 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCA3Q99618 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.24■□□□□ 0.83
CDCA3Q99618 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA3Q99618 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDCA3Q99618 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCA3Q99618 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCA3Q99618 AC012313.10-201ENST00000623509 926 ntBASIC20.24■□□□□ 0.83
CDCA3Q99618 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CDCA3Q99618 AF106564.1-201ENST00000607058 2553 ntBASIC20.24■□□□□ 0.83
CDCA3Q99618 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCA3Q99618 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDCA3Q99618 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCA3Q99618 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDCA3Q99618 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCA3Q99618 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCA3Q99618 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCA3Q99618 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.23■□□□□ 0.83
CDCA3Q99618 MIR3652-201ENST00000579335 131 ntBASIC20.23■□□□□ 0.83
CDCA3Q99618 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCA3Q99618 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCA3Q99618 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCA3Q99618 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCA3Q99618 FEM1AP1-201ENST00000431297 1995 ntBASIC20.23■□□□□ 0.83
CDCA3Q99618 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA3Q99618 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA3Q99618 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CDCA3Q99618 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA3Q99618 HBZP1-201ENST00000354915 429 ntBASIC20.22■□□□□ 0.83
CDCA3Q99618 AC034232.1-201ENST00000506026 1064 ntBASIC20.22■□□□□ 0.83
CDCA3Q99618 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.22■□□□□ 0.83
CDCA3Q99618 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.22■□□□□ 0.83
CDCA3Q99618 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA3Q99618 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCA3Q99618 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA3Q99618 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA3Q99618 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA3Q99618 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms