Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 RBM17P1-201ENST00000453646 1190 ntBASIC16.32■□□□□ 0.2
TIMD4Q96H15 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 AL691432.2-201ENST00000607222 2038 ntBASIC16.31■□□□□ 0.2
TIMD4Q96H15 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 DGCR10-201ENST00000609839 495 ntBASIC16.31■□□□□ 0.2
TIMD4Q96H15 MIR6786-201ENST00000616843 113 ntBASIC16.31■□□□□ 0.2
TIMD4Q96H15 AC133561.5-201ENST00000635547 218 ntBASIC16.31■□□□□ 0.2
TIMD4Q96H15 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TIMD4Q96H15 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
TIMD4Q96H15 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 AC211429.1-201ENST00000415277 523 ntBASIC16.3■□□□□ 0.2
TIMD4Q96H15 AC087499.1-201ENST00000418141 1075 ntBASIC16.3■□□□□ 0.2
TIMD4Q96H15 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMD4Q96H15 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TIMD4Q96H15 AC092667.1-201ENST00000434301 2586 ntBASIC16.3■□□□□ 0.2
TIMD4Q96H15 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 AC004980.1-204ENST00000429707 299 ntBASIC16.29■□□□□ 0.2
TIMD4Q96H15 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.29■□□□□ 0.2
TIMD4Q96H15 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMD4Q96H15 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMD4Q96H15 AP000525.1-201ENST00000608286 694 ntBASIC16.29■□□□□ 0.2
TIMD4Q96H15 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMD4Q96H15 HLA-A-209ENST00000638375 975 ntBASIC16.29■□□□□ 0.2
TIMD4Q96H15 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMD4Q96H15 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 AL391422.3-201ENST00000603791 2761 ntBASIC16.28■□□□□ 0.2
TIMD4Q96H15 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms