Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 MIR4785-201ENST00000585005 73 ntBASIC19.32■□□□□ 0.68
SCAMP4Q969E2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.32■□□□□ 0.68
SCAMP4Q969E2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SCAMP4Q969E2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.31■□□□□ 0.68
SCAMP4Q969E2 AL355355.2-201ENST00000442321 338 ntBASIC19.31■□□□□ 0.68
SCAMP4Q969E2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 TSPY15P-201ENST00000457163 923 ntBASIC19.31■□□□□ 0.68
SCAMP4Q969E2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 AP003071.4-201ENST00000562276 1284 ntBASIC19.31■□□□□ 0.68
SCAMP4Q969E2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP4Q969E2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 KRT17P2-201ENST00000300992 1314 ntBASIC19.3■□□□□ 0.68
SCAMP4Q969E2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 AC004980.1-204ENST00000429707 299 ntBASIC19.3■□□□□ 0.68
SCAMP4Q969E2 NUDT16P1-203ENST00000513809 620 ntBASIC19.3■□□□□ 0.68
SCAMP4Q969E2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP4Q969E2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 AL031985.4-201ENST00000642138 673 ntBASIC19.29■□□□□ 0.68
SCAMP4Q969E2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP4Q969E2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 AL355075.4-201ENST00000554988 638 ntBASIC19.28■□□□□ 0.68
SCAMP4Q969E2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 AC131212.4-201ENST00000623606 975 ntBASIC19.28■□□□□ 0.68
SCAMP4Q969E2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.28■□□□□ 0.68
SCAMP4Q969E2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms