Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3RF3Q8TEJ3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 AL445228.2-201ENST00000605589 952 ntBASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.09■■□□□ 1.29
SH3RF3Q8TEJ3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3RF3Q8TEJ3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.08■■□□□ 1.28
SH3RF3Q8TEJ3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH3RF3Q8TEJ3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH3RF3Q8TEJ3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.08■■□□□ 1.28
SH3RF3Q8TEJ3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.08■■□□□ 1.28
SH3RF3Q8TEJ3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 AC104076.2-201ENST00000448912 469 ntBASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 AL049597.2-201ENST00000565575 961 ntBASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SH3RF3Q8TEJ3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 AC128688.1-201ENST00000487626 519 ntBASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 KRT18P35-201ENST00000510488 1269 ntBASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3RF3Q8TEJ3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3RF3Q8TEJ3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms