Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LDB1Q86U70 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.38■□□□□ 0.69
LDB1Q86U70 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.38■□□□□ 0.69
LDB1Q86U70 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LDB1Q86U70 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LDB1Q86U70 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LDB1Q86U70 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.37■□□□□ 0.69
LDB1Q86U70 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 CD99P1-205ENST00000527459 561 ntBASIC19.37■□□□□ 0.69
LDB1Q86U70 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.37■□□□□ 0.69
LDB1Q86U70 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.37■□□□□ 0.69
LDB1Q86U70 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LDB1Q86U70 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LDB1Q86U70 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
LDB1Q86U70 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 AP000974.1-201ENST00000623909 2387 ntBASIC19.36■□□□□ 0.69
LDB1Q86U70 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LDB1Q86U70 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 KRT17P3-201ENST00000420566 1262 ntBASIC19.36■□□□□ 0.69
LDB1Q86U70 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.36■□□□□ 0.69
LDB1Q86U70 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.36■□□□□ 0.69
LDB1Q86U70 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.36■□□□□ 0.69
LDB1Q86U70 MTDHP1-201ENST00000605323 784 ntBASIC19.36■□□□□ 0.69
LDB1Q86U70 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.36■□□□□ 0.69
LDB1Q86U70 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LDB1Q86U70 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LDB1Q86U70 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LDB1Q86U70 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LDB1Q86U70 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 KRT8P8-201ENST00000434750 1448 ntBASIC19.35■□□□□ 0.69
LDB1Q86U70 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LDB1Q86U70 AIRN-201ENST00000601203 4374 ntBASIC19.35■□□□□ 0.69
LDB1Q86U70 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.35■□□□□ 0.69
LDB1Q86U70 ZNF815P-204ENST00000434898 1737 ntBASIC19.35■□□□□ 0.69
LDB1Q86U70 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.35■□□□□ 0.69
LDB1Q86U70 KRT18P16-201ENST00000510337 1294 ntBASIC19.35■□□□□ 0.69
LDB1Q86U70 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.35■□□□□ 0.69
LDB1Q86U70 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.35■□□□□ 0.69
LDB1Q86U70 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 AL023875.1-201ENST00000640777 796 ntBASIC19.35■□□□□ 0.69
LDB1Q86U70 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LDB1Q86U70 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.35■□□□□ 0.69
LDB1Q86U70 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.35■□□□□ 0.69
LDB1Q86U70 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.35■□□□□ 0.69
LDB1Q86U70 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms