Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.68■■□□□ 1.06
SWSAP1Q6NVH7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 AC091390.4-202ENST00000476426 537 ntBASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SWSAP1Q6NVH7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 CRYGFP-201ENST00000418459 633 ntBASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 AP000692.2-201ENST00000608391 879 ntBASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 DGCR10-201ENST00000609839 495 ntBASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.66■■□□□ 1.06
SWSAP1Q6NVH7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 NAPSB-206ENST00000562112 1266 ntBASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 SLC25A1P4-201ENST00000567977 778 ntBASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 AC010947.1-201ENST00000623454 693 ntBASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SWSAP1Q6NVH7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SWSAP1Q6NVH7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SWSAP1Q6NVH7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SWSAP1Q6NVH7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SWSAP1Q6NVH7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms