Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 AC063926.2-201ENST00000623766 1308 ntBASIC10.42□□□□□ -0.74
RNF213Q63HN8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 AC034232.1-201ENST00000506026 1064 ntBASIC10.42□□□□□ -0.74
RNF213Q63HN8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RNF213Q63HN8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
RNF213Q63HN8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 DNAJB3-201ENST00000446806 729 ntBASIC10.41□□□□□ -0.74
RNF213Q63HN8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 CNN2P11-201ENST00000429351 262 ntBASIC10.41□□□□□ -0.74
RNF213Q63HN8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC10.41□□□□□ -0.74
RNF213Q63HN8 AF228730.6-201ENST00000641497 218 ntBASIC10.41□□□□□ -0.74
RNF213Q63HN8 AC084121.3-201ENST00000641716 218 ntBASIC10.41□□□□□ -0.74
RNF213Q63HN8 AC105233.6-201ENST00000642093 218 ntBASIC10.41□□□□□ -0.74
RNF213Q63HN8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 DRAXINP1-201ENST00000437611 948 ntBASIC10.4□□□□□ -0.74
RNF213Q63HN8 FAM197Y8-203ENST00000450145 560 ntBASIC10.4□□□□□ -0.74
RNF213Q63HN8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RNF213Q63HN8 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.4□□□□□ -0.74
RNF213Q63HN8 MIR6799-201ENST00000620297 69 ntBASIC10.4□□□□□ -0.74
RNF213Q63HN8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
RNF213Q63HN8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
RNF213Q63HN8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
RNF213Q63HN8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
RNF213Q63HN8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 KRT8P26-201ENST00000534154 1276 ntBASIC10.4□□□□□ -0.75
RNF213Q63HN8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.4□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms