Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL13A1Q5TAT6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 AL591424.1-201ENST00000442569 1213 ntBASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 KRT18P3-201ENST00000451602 1288 ntBASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 AC040169.1-201ENST00000565382 521 ntBASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL13A1Q5TAT6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 NUS1P2-201ENST00000417358 873 ntBASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 BCRP1-201ENST00000444246 691 ntBASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL13A1Q5TAT6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 AC079602.3-201ENST00000623931 403 ntBASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 AC092068.2-201ENST00000590491 1708 ntBASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.96■■□□□ 1.11
COL13A1Q5TAT6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 Z69720.1-201ENST00000601483 472 ntBASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 AL096865.1-201ENST00000606796 927 ntBASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL13A1Q5TAT6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 RPS2P1-201ENST00000434010 821 ntBASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 AF228730.6-201ENST00000641497 218 ntBASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 AC084121.3-201ENST00000641716 218 ntBASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 AC105233.6-201ENST00000642093 218 ntBASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
COL13A1Q5TAT6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 MIR662-201ENST00000384847 95 ntBASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL13A1Q5TAT6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms