Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.2■□□□□ 0.02
CFHR3Q02985 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.2■□□□□ 0.02
CFHR3Q02985 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.2■□□□□ 0.02
CFHR3Q02985 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CFHR3Q02985 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.2■□□□□ 0.02
CFHR3Q02985 NUDT16P1-203ENST00000513809 620 ntBASIC15.2■□□□□ 0.02
CFHR3Q02985 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.2■□□□□ 0.02
CFHR3Q02985 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.2■□□□□ 0.02
CFHR3Q02985 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.2■□□□□ 0.02
CFHR3Q02985 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CFHR3Q02985 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFHR3Q02985 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CFHR3Q02985 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 KRT17P2-201ENST00000300992 1314 ntBASIC15.19■□□□□ 0.02
CFHR3Q02985 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.19■□□□□ 0.02
CFHR3Q02985 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CFHR3Q02985 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.19■□□□□ 0.02
CFHR3Q02985 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.19■□□□□ 0.02
CFHR3Q02985 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.19■□□□□ 0.02
CFHR3Q02985 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.19■□□□□ 0.02
CFHR3Q02985 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.19■□□□□ 0.02
CFHR3Q02985 AL031985.4-201ENST00000642138 673 ntBASIC15.19■□□□□ 0.02
CFHR3Q02985 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CFHR3Q02985 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CFHR3Q02985 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.19■□□□□ 0.02
CFHR3Q02985 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
CFHR3Q02985 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFHR3Q02985 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CFHR3Q02985 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFHR3Q02985 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CFHR3Q02985 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFHR3Q02985 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CFHR3Q02985 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFHR3Q02985 AC116562.2-201ENST00000507042 360 ntBASIC15.18■□□□□ 0.02
CFHR3Q02985 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.18■□□□□ 0.02
CFHR3Q02985 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.18■□□□□ 0.02
CFHR3Q02985 AP003071.4-201ENST00000562276 1284 ntBASIC15.18■□□□□ 0.02
CFHR3Q02985 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.18■□□□□ 0.02
CFHR3Q02985 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.18■□□□□ 0.02
CFHR3Q02985 AC131212.4-201ENST00000623606 975 ntBASIC15.18■□□□□ 0.02
CFHR3Q02985 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.18■□□□□ 0.02
CFHR3Q02985 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.18■□□□□ 0.02
CFHR3Q02985 AC125437.2-201ENST00000625180 2167 ntBASIC15.18■□□□□ 0.02
CFHR3Q02985 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.18■□□□□ 0.02
CFHR3Q02985 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFHR3Q02985 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms