Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH4P55283 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH4P55283 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDH4P55283 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.89■□□□□ 0.78
CDH4P55283 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.89■□□□□ 0.77
CDH4P55283 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH4P55283 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH4P55283 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.89■□□□□ 0.77
CDH4P55283 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
CDH4P55283 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 FSCN1P1-201ENST00000568912 1481 ntBASIC19.88■□□□□ 0.77
CDH4P55283 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH4P55283 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 REXO1L10P-201ENST00000615707 1290 ntBASIC19.88■□□□□ 0.77
CDH4P55283 REXO1L12P-201ENST00000622156 912 ntBASIC19.88■□□□□ 0.77
CDH4P55283 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.88■□□□□ 0.77
CDH4P55283 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH4P55283 ZNF815P-204ENST00000434898 1737 ntBASIC19.88■□□□□ 0.77
CDH4P55283 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH4P55283 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH4P55283 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH4P55283 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH4P55283 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH4P55283 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH4P55283 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.87■□□□□ 0.77
CDH4P55283 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.87■□□□□ 0.77
CDH4P55283 AL355075.4-201ENST00000554988 638 ntBASIC19.87■□□□□ 0.77
CDH4P55283 MIR6786-201ENST00000616843 113 ntBASIC19.87■□□□□ 0.77
CDH4P55283 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CDH4P55283 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CDH4P55283 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.87■□□□□ 0.77
CDH4P55283 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH4P55283 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 LINC01465-201ENST00000408887 1940 ntBASIC19.86■□□□□ 0.77
CDH4P55283 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDH4P55283 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CDH4P55283 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.86■□□□□ 0.77
CDH4P55283 B3GAT3P1-201ENST00000471720 806 ntBASIC19.86■□□□□ 0.77
CDH4P55283 Z85996.1-201ENST00000494644 937 ntBASIC19.86■□□□□ 0.77
CDH4P55283 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDH4P55283 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH4P55283 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH4P55283 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDH4P55283 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH4P55283 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH4P55283 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH4P55283 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH4P55283 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH4P55283 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms