Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF140P52738 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZNF140P52738 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF140P52738 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF140P52738 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZNF140P52738 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 LINC01465-201ENST00000408887 1940 ntBASIC19.35■□□□□ 0.69
ZNF140P52738 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF140P52738 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZNF140P52738 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF140P52738 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF140P52738 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF140P52738 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF140P52738 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF140P52738 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF140P52738 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ZNF140P52738 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF140P52738 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF140P52738 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF140P52738 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF140P52738 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF140P52738 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF140P52738 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
ZNF140P52738 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF140P52738 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF140P52738 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
ZNF140P52738 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ZNF140P52738 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF140P52738 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF140P52738 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ZNF140P52738 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF140P52738 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.33■□□□□ 0.68
ZNF140P52738 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF140P52738 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF140P52738 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF140P52738 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF140P52738 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF140P52738 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF140P52738 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF140P52738 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF140P52738 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF140P52738 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 TEX21P-204ENST00000641479 1693 ntBASIC19.32■□□□□ 0.68
ZNF140P52738 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms