Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCK1P35558 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCK1P35558 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PCK1P35558 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.41■□□□□ 0.86
PCK1P35558 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PCK1P35558 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
PCK1P35558 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.41■□□□□ 0.86
PCK1P35558 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCK1P35558 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
PCK1P35558 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.41■□□□□ 0.86
PCK1P35558 AP006587.1-201ENST00000534129 1502 ntBASIC20.41■□□□□ 0.86
PCK1P35558 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCK1P35558 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PCK1P35558 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCK1P35558 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCK1P35558 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
PCK1P35558 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCK1P35558 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.4■□□□□ 0.86
PCK1P35558 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCK1P35558 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 YBX1P10-201ENST00000444752 975 ntBASIC20.4■□□□□ 0.86
PCK1P35558 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.4■□□□□ 0.86
PCK1P35558 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.4■□□□□ 0.86
PCK1P35558 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCK1P35558 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.4■□□□□ 0.86
PCK1P35558 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCK1P35558 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCK1P35558 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PCK1P35558 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCK1P35558 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCK1P35558 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 POM121L13P-201ENST00000422362 380 ntBASIC20.39■□□□□ 0.85
PCK1P35558 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.39■□□□□ 0.85
PCK1P35558 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCK1P35558 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCK1P35558 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
PCK1P35558 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 Z82202.1-201ENST00000623446 1880 ntBASIC20.39■□□□□ 0.85
PCK1P35558 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCK1P35558 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCK1P35558 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.38■□□□□ 0.85
PCK1P35558 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.38■□□□□ 0.85
PCK1P35558 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PCK1P35558 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCK1P35558 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCK1P35558 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCK1P35558 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PCK1P35558 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms