Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DOBP13765 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DOBP13765 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 KRT18P16-201ENST00000510337 1294 ntBASIC17.4■□□□□ 0.38
HLA-DOBP13765 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 PRKY-204ENST00000533551 1019 ntBASIC17.4■□□□□ 0.38
HLA-DOBP13765 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOBP13765 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DOBP13765 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DOBP13765 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DOBP13765 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DOBP13765 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 AC087289.5-201ENST00000586076 3175 ntBASIC17.39■□□□□ 0.37
HLA-DOBP13765 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOBP13765 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DOBP13765 KRT8P8-201ENST00000434750 1448 ntBASIC17.38■□□□□ 0.37
HLA-DOBP13765 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DOBP13765 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 AC006058.3-201ENST00000606217 1069 ntBASIC17.38■□□□□ 0.37
HLA-DOBP13765 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOBP13765 AL023875.1-201ENST00000640777 796 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms