Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.66■□□□□ 0.42
FREM3P0C091 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
FREM3P0C091 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.66■□□□□ 0.42
FREM3P0C091 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.66■□□□□ 0.42
FREM3P0C091 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 AC079598.2-202ENST00000546624 1451 ntBASIC17.66■□□□□ 0.42
FREM3P0C091 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.66■□□□□ 0.42
FREM3P0C091 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.66■□□□□ 0.42
FREM3P0C091 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
FREM3P0C091 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.66■□□□□ 0.42
FREM3P0C091 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.66■□□□□ 0.42
FREM3P0C091 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.66■□□□□ 0.42
FREM3P0C091 CR392000.1-201ENST00000624770 1228 ntBASIC17.66■□□□□ 0.42
FREM3P0C091 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.66■□□□□ 0.42
FREM3P0C091 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FREM3P0C091 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.65■□□□□ 0.42
FREM3P0C091 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FREM3P0C091 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.65■□□□□ 0.42
FREM3P0C091 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.65■□□□□ 0.42
FREM3P0C091 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.65■□□□□ 0.42
FREM3P0C091 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FREM3P0C091 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.65■□□□□ 0.42
FREM3P0C091 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 UNC93B2-201ENST00000285383 730 ntBASIC17.65■□□□□ 0.42
FREM3P0C091 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FREM3P0C091 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.65■□□□□ 0.42
FREM3P0C091 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.65■□□□□ 0.42
FREM3P0C091 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.65■□□□□ 0.42
FREM3P0C091 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.65■□□□□ 0.42
FREM3P0C091 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
FREM3P0C091 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.42
FREM3P0C091 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.64■□□□□ 0.41
FREM3P0C091 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.64■□□□□ 0.41
FREM3P0C091 KRT18P16-201ENST00000510337 1294 ntBASIC17.64■□□□□ 0.41
FREM3P0C091 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
FREM3P0C091 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.64■□□□□ 0.41
FREM3P0C091 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
FREM3P0C091 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
FREM3P0C091 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FREM3P0C091 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.63■□□□□ 0.41
FREM3P0C091 AC087499.1-201ENST00000418141 1075 ntBASIC17.63■□□□□ 0.41
FREM3P0C091 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.63■□□□□ 0.41
FREM3P0C091 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.63■□□□□ 0.41
FREM3P0C091 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FREM3P0C091 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
FREM3P0C091 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FREM3P0C091 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.63■□□□□ 0.41
FREM3P0C091 RN7SL850P-201ENST00000579959 291 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms