Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNRNP200O75643 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNRNP200O75643 KRT8P41-201ENST00000533985 1514 ntBASIC18.62■□□□□ 0.57
SNRNP200O75643 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
SNRNP200O75643 TREX1-205ENST00000625293 1783 ntBASIC18.61■□□□□ 0.57
SNRNP200O75643 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.61■□□□□ 0.57
SNRNP200O75643 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.61■□□□□ 0.57
SNRNP200O75643 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SNRNP200O75643 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
SNRNP200O75643 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
SNRNP200O75643 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.61■□□□□ 0.57
SNRNP200O75643 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.61■□□□□ 0.57
SNRNP200O75643 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.61■□□□□ 0.57
SNRNP200O75643 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.61■□□□□ 0.57
SNRNP200O75643 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.61■□□□□ 0.57
SNRNP200O75643 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNRNP200O75643 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNRNP200O75643 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SNRNP200O75643 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.6■□□□□ 0.57
SNRNP200O75643 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNRNP200O75643 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SNRNP200O75643 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNRNP200O75643 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNRNP200O75643 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SNRNP200O75643 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNRNP200O75643 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SNRNP200O75643 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNRNP200O75643 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SNRNP200O75643 B3GAT3P1-201ENST00000471720 806 ntBASIC18.59■□□□□ 0.57
SNRNP200O75643 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.59■□□□□ 0.57
SNRNP200O75643 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.59■□□□□ 0.57
SNRNP200O75643 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.59■□□□□ 0.57
SNRNP200O75643 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SNRNP200O75643 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNRNP200O75643 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
SNRNP200O75643 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.59■□□□□ 0.57
SNRNP200O75643 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNRNP200O75643 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNRNP200O75643 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNRNP200O75643 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNRNP200O75643 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
SNRNP200O75643 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNRNP200O75643 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.58■□□□□ 0.57
SNRNP200O75643 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.58■□□□□ 0.57
SNRNP200O75643 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.58■□□□□ 0.57
SNRNP200O75643 AC026471.5-201ENST00000615068 467 ntBASIC18.58■□□□□ 0.57
SNRNP200O75643 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.58■□□□□ 0.57
SNRNP200O75643 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNRNP200O75643 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP200O75643 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.58■□□□□ 0.56
SNRNP200O75643 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP200O75643 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SNRNP200O75643 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP200O75643 MESTP1-201ENST00000404287 994 ntBASIC18.58■□□□□ 0.56
SNRNP200O75643 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.58■□□□□ 0.56
SNRNP200O75643 RBM17P1-201ENST00000453646 1190 ntBASIC18.58■□□□□ 0.56
SNRNP200O75643 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.58■□□□□ 0.56
SNRNP200O75643 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNRNP200O75643 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SNRNP200O75643 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRNP200O75643 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.57■□□□□ 0.56
SNRNP200O75643 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNRNP200O75643 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.57■□□□□ 0.56
SNRNP200O75643 UNC93B2-201ENST00000285383 730 ntBASIC18.57■□□□□ 0.56
SNRNP200O75643 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.57■□□□□ 0.56
SNRNP200O75643 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 AC073912.3-201ENST00000624414 853 ntBASIC18.57■□□□□ 0.56
SNRNP200O75643 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms