Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA12O60330 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 AC006128.1-201ENST00000624704 1661 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 AC004980.1-204ENST00000429707 299 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 ECEL1P2-202ENST00000465689 757 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 AC097488.1-201ENST00000507834 756 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 KRT18P16-201ENST00000510337 1294 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 WWOX-216ENST00000569818 525 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA12O60330 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA12O60330 PCDHAC2-203ENST00000615316 3011 ntBASIC19.25■□□□□ 0.67
PCDHGA12O60330 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 AFG3L1P-217ENST00000557444 2447 ntBASIC19.24■□□□□ 0.67
PCDHGA12O60330 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 TFP1-202ENST00000475455 1573 ntBASIC19.24■□□□□ 0.67
PCDHGA12O60330 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA12O60330 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA12O60330 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CRYGFP-201ENST00000418459 633 ntBASIC19.23■□□□□ 0.67
PCDHGA12O60330 TUBB8P6-201ENST00000436895 1288 ntBASIC19.23■□□□□ 0.67
PCDHGA12O60330 BX664615.1-201ENST00000443558 458 ntBASIC19.23■□□□□ 0.67
PCDHGA12O60330 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA12O60330 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA12O60330 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms