Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.28■□□□□ 0.52
RRP8O43159 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.27■□□□□ 0.52
RRP8O43159 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RRP8O43159 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.27■□□□□ 0.52
RRP8O43159 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RRP8O43159 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.27■□□□□ 0.52
RRP8O43159 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.27■□□□□ 0.52
RRP8O43159 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.27■□□□□ 0.52
RRP8O43159 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.27■□□□□ 0.52
RRP8O43159 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.27■□□□□ 0.52
RRP8O43159 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.27■□□□□ 0.52
RRP8O43159 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RRP8O43159 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RRP8O43159 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RRP8O43159 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
RRP8O43159 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.27■□□□□ 0.51
RRP8O43159 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RRP8O43159 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RRP8O43159 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RRP8O43159 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
RRP8O43159 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.26■□□□□ 0.51
RRP8O43159 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.26■□□□□ 0.51
RRP8O43159 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RRP8O43159 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 KRT18P38-201ENST00000449496 1282 ntBASIC18.26■□□□□ 0.51
RRP8O43159 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.26■□□□□ 0.51
RRP8O43159 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.26■□□□□ 0.51
RRP8O43159 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RRP8O43159 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.26■□□□□ 0.51
RRP8O43159 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.26■□□□□ 0.51
RRP8O43159 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.26■□□□□ 0.51
RRP8O43159 PKD1P6-201ENST00000343738 4769 ntBASIC18.26■□□□□ 0.51
RRP8O43159 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.26■□□□□ 0.51
RRP8O43159 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RRP8O43159 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.26■□□□□ 0.51
RRP8O43159 AC018553.1-201ENST00000616682 1458 ntBASIC18.26■□□□□ 0.51
RRP8O43159 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RRP8O43159 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.25■□□□□ 0.51
RRP8O43159 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.25■□□□□ 0.51
RRP8O43159 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.25■□□□□ 0.51
RRP8O43159 FAAHP1-202ENST00000446499 1238 ntBASIC18.25■□□□□ 0.51
RRP8O43159 FDX1P1-201ENST00000449115 551 ntBASIC18.25■□□□□ 0.51
RRP8O43159 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.25■□□□□ 0.51
RRP8O43159 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.25■□□□□ 0.51
RRP8O43159 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
RRP8O43159 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.25■□□□□ 0.51
RRP8O43159 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.25■□□□□ 0.51
RRP8O43159 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.25■□□□□ 0.51
RRP8O43159 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RRP8O43159 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RRP8O43159 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 LINC01311-201ENST00000565162 1445 ntBASIC18.24■□□□□ 0.51
RRP8O43159 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.24■□□□□ 0.51
RRP8O43159 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.24■□□□□ 0.51
RRP8O43159 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.24■□□□□ 0.51
RRP8O43159 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RRP8O43159 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.24■□□□□ 0.51
RRP8O43159 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.24■□□□□ 0.51
RRP8O43159 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RRP8O43159 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms